Romboutsia sp. CE17: HF520_13335
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Entry
HF520_13335 CDS
T06535
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03030
DNA replication
roc03430
Mismatch repair
roc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF520_13335 (dnaX)
03430 Mismatch repair
HF520_13335 (dnaX)
03440 Homologous recombination
HF520_13335 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roc03032
]
HF520_13335 (dnaX)
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_13335 (dnaX)
Enzymes [BR:
roc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF520_13335 (dnaX)
DNA replication proteins [BR:
roc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF520_13335 (dnaX)
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF520_13335 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
AAA_22
RCF1-5-like_lid
DNA_pol3_delta_C
RuvB_N
AAA_lid_RFC1
AAA_5
TIP49
AAA_2
AAA_30
AAA_assoc_2
AAA_24
AAA_16
Gp44_lid
ResIII
AAA_18
AAA_19
AAA_7
PIF1
Mg_chelatase
TIP49_C
Motif
Other DBs
NCBI-ProteinID:
QJA09828
LinkDB
All DBs
Position
2779412..2781031
Genome browser
AA seq
539 aa
AA seq
DB search
MHKALYRVYRPQKFEDVVGQEHITKTLRNQIENNNIGHAYLFSGTRGTGKTSTAKIFARA
VNCLESKDQEPCNNCDVCKDILNDNIMDVVEIDAASNNSVDDIRELRESVKYSPTKAKYK
VYIIDEVHMLSQGAFNALLKTLEEPPSYVIFILATTEPHKIPATILSRCQRFDFKRVTVK
DITSRMKKICSEEDIEVEDKALNLIARNSQGALRDALSILDQCISFGDEKIEYNDVVELL
GTVNIEQLFDLAQYIINQDTKESLKVLNEFIVWGKDIRNLINDLIDHFRNLMICKVSTDL
DEIISLPDEIIDQLRSQADTVNNNDLIRILNILSTTQDNIKTASNPRVVAEVTMMKIAQP
MFDESKEALIKRIENLERVIESGNIKVTTVSDSQKEESINIDNKEEVEYEQVKSEDVNLI
EHAWKNILKSIKADKNMPVYALLGDVRDFNVYNSQLYLIFDDNYGFAKTRLSSPETIDYI
QNKIKEIVNRSFSVKIFLKSEVKNIDLDIKETANDKGEEILKNIVSKDLLEVKEHIEEN
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgcataaagcattgtatagagtgtataggccacagaagtttgaagatgtagttggtcaa
gaacatattaccaagaccttaagaaatcaaatagagaacaacaatataggtcatgcatat
ttattttcaggaacaaggggaacaggaaagacatctactgcaaaaatatttgcaagagct
gtcaactgtttagaaagtaaagatcaagaaccttgtaacaattgtgatgtatgtaaggat
atattgaatgataatattatggatgttgtagagatagatgcagcttctaataatagtgtt
gatgatataagagaacttagagaaagtgtgaaatattcacctactaaggctaaatacaaa
gtatatataatagatgaagttcatatgctgtctcaaggcgcatttaatgcgctattaaag
acattagaagaacctccatcatatgtaatatttatattagcaacgacagaaccacataaa
atacctgcaacaatattatctagatgtcaaagatttgattttaaaagagtaacagtaaaa
gatattacatcgagaatgaaaaagatatgttcagaagaagatattgaggttgaagacaaa
gctctgaatttaatcgcaagaaattcacaaggagcacttagagatgctcttagcatactg
gaccaatgtatctcttttggagatgaaaaaatagaatataatgatgtagttgaattacta
ggaacagtaaatatagaacagttatttgatttagctcaatacataataaatcaagacaca
aaagagtcgcttaaagttttaaatgaatttatagtttggggtaaagatataagaaattta
ataaatgatttaattgatcattttagaaatttaatgatatgtaaagtatctacagattta
gatgaaataatatctttgccagatgaaattatagatcaattaaggtcacaagcggatact
gtaaataataatgatttaataagaatattaaatatactatcaactactcaagataatata
aagacagcttctaatcctagagttgtagcagaggttactatgatgaagatagcacaacct
atgtttgatgaaagtaaagaagccttaataaaaagaatagaaaacttagagagagtaatt
gagagtggaaatataaaagttactactgtaagtgatagccaaaaagaagaatctattaat
attgataataaagaagaagttgagtatgagcaagttaagagtgaagatgttaatttaata
gaacatgcttggaaaaacatactaaaaagtataaaggcagataaaaatatgccagtatac
gctttattaggagatgtaagggattttaacgtatataatagtcaattatacttaatattt
gatgataattatggatttgctaaaactaggcttagttctcctgaaacaatagattatata
caaaataaaattaaagaaatagttaatagaagctttagtgtgaaaatattcctaaaatca
gaagttaaaaacatagatttagacataaaagaaactgcaaatgataaaggtgaagaaatc
ttaaagaatattgttagcaaagatttattagaagttaaagaacatatagaggaaaattag
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