Romboutsia sp. CE17: HF520_13915
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Entry
HF520_13915 CDS
T06535
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
roc
Romboutsia sp. CE17
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roc03016
]
HF520_13915 (truA)
Enzymes [BR:
roc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HF520_13915 (truA)
Transfer RNA biogenesis [BR:
roc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HF520_13915 (truA)
Prokaryotic type
HF520_13915 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Pus10_C
DUF1359
Motif
Other DBs
NCBI-ProteinID:
QJA09900
LinkDB
All DBs
Position
2857054..2857785
Genome browser
AA seq
243 aa
AA seq
DB search
MRNLKIKIQYNGANYCGWQKQPDSLGIQGTIEKAIYEITNEEVKITGSGRTDAGVHALGQ
VANFKLNSKIPADRIPNALNAKLPKDIAVIECEEVKDSFHARYSAKGKRYRYLIYNSPYR
NPIYKDTSYHVKYDLDFNKMCEEAKSLIGTHDFKGFMSSGSSVVDTVRTIYDVEITREEN
LITIEVEGNGFLYNMVRIIVGTLVDIGRGRIEDNLAEIINSKSRSKTGHTAPAHGLFLKK
VDY
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgagaaatttaaagataaaaatacagtataatggagccaattattgtggatggcaaaag
cagcctgattctttaggtatacaaggaacaatcgaaaaggctatttatgaaataacaaat
gaagaagtaaaaattactggatctgggagaactgatgcaggagttcatgctttaggacaa
gtagcaaactttaaattaaactctaaaatacctgctgatagaataccaaatgcattaaat
gctaaactgcctaaagatatagctgtaatagaatgtgaagaagttaaagattcgttccat
gctagatatagcgcaaaaggtaagaggtatagatatttaatttacaatagtccttataga
aatcctatttataaagacacatcttatcatgtaaaatatgatcttgattttaataaaatg
tgcgaagaagctaaatcattaataggaacacacgactttaaaggttttatgagttcagga
tcgtctgtagtagatacagttagaactatatatgatgtagaaataactagagaagaaaat
ttaattactatagaagtagaaggtaatggttttttatataatatggtaagaataatagta
gggacattagtagatataggtagaggtagaatagaagataatttagctgaaataattaat
tctaagagtagatctaaaactggtcacactgctccagcacatggattatttcttaaaaaa
gttgattattag
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