Romboutsia sp. CE17: HF520_14445
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Entry
HF520_14445 CDS
T06535
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
roc
Romboutsia sp. CE17
Pathway
roc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HF520_14445 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_14445 (uvrA)
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HF520_14445 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HF520_14445 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
RsgA_GTPase
AAA_29
AAA_21
nSTAND1
nSTAND3
AAA_16
DnaJ_CXXCXGXG
AAA_22
AAA_18
Viral_helicase1
nSTAND6
ATPase
AAA_15
MMR_HSR1
MeaB
NACHT
cobW
ExoX-like_C
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QJA09983
LinkDB
All DBs
Position
2965635..2968460
Genome browser
AA seq
941 aa
AA seq
DB search
MEDKIIIKGAKEHNLKNVNLELPRNKFIVFTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLGQMEKPNVEYIEGLSPAISIDQKTTSKNPRSTVGTVTEIYDYLRLLFARVGEVH
CPTCGEKISQMTIQEIVDKVLELPERTKLQILSPVVRGQKGTHKKVIDNIKKEGFVRIRV
DGENYEVTDEFELNKNQKHNIEVVVDRIIVKDGIESRLADSIETAVKLSDGLVIAQIIDG
EEILYSTKFACPEHGIGIEELSPRMFSFNAPFGACTVCNGLGESKEVDPELVIPNKELSI
KQGAIAAWGSVSTSDDTYYSKMVQSLAAHFNVSLDTPFKDLPEDFVQELLYGENNIMVEF
IFESKFGGRREYKAPFEGVIVNLERRYRETNSEYSREKIEEFMAERPCPKCKGSRLRKEV
LSVLVDNKNIMDVTDLSVNELIDFISNIKLSEKQEFIAHEILKEIKGRASFLKDVGLDYL
NLSRKAGTLSGGEAQRIRLATQIGSALVGVLYVLDEPSIGLHQRDNDKLIATLRHLTDLG
NTLIVVEHDEDTMREADYIVDIGPGAGIHGGEIVGEGTLDEILANENSITGQYLSGKKQI
VIPEKTREGNGSFIEVVKASENNLKNISVKFPLGKFICVTGVSGSGKSTLINDILYTGIA
SKVNRLRARPGKHKEIKGIENIDKVINIDQSPIGRTPRSNPATYTGVFDQIRDLFAATNE
AKARGYKKGRFSFNVKGGRCEACKGDGIIKIEMHFLPDVYVPCEVCKGERYNRETLQVKY
KDKTIADVLDMNVEEALEFFENIPNIKRKLETLMDVGLSYIKLGQPSTQLSGGEAQRIKL
ATELSKRPTGKTIYILDEPTTGLHMADVDKLIDVLQRLADTGNTIVVIEHNLDVIKTCDY
IIDLGPEGGDKGGTIVAQGTPRDVSNVEGSYTGKFLKRYFK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggaagataagatcataataaaaggcgcaaaagaacataatctaaaaaatgttaatttg
gaacttccgagaaataagtttatagttttcacaggactatcaggttcaggtaaatcttct
ttagcttttgatactatttatgcagaaggtcaaagaagatatgtggaaagtttatcagca
tatgcaagacaatttttaggtcaaatggaaaaacctaatgttgaatatatagaaggttta
tcacctgcaatatcaatagatcaaaaaacaacatctaaaaacccacgttcaacagtaggt
actgttactgaaatatatgattatttaagattattatttgcaagagttggggaagtacat
tgtcctacatgtggagaaaaaataagtcaaatgactattcaagaaatagtagataaggta
ttggaattacctgaaagaactaaattacaaatattgtcgccagtagttagaggccaaaaa
ggaactcataaaaaggttatagataatataaaaaaggaaggattcgtaagaattagagta
gatggagaaaattacgaagttactgatgaatttgaattaaacaaaaatcaaaaacataat
atagaagttgttgtagatagaataattgttaaagatggaatagagtctagattagcagat
tcaatagaaaccgctgtaaagctatctgatggacttgttatagctcaaattatagatgga
gaagaaattctttactctactaaatttgcttgtccagagcatggaataggaatagaggaa
ctatcaccaagaatgttctcatttaatgctccttttggtgcttgtacagtatgtaatggt
ttaggagaaagtaaagaggttgatccagaactagttatacctaataaagaattatctata
aagcaaggtgcaattgctgcatggggatctgtaagtacgagcgatgatacttactatagc
aagatggtgcaaagcttggcagcacattttaatgtatcattagatacaccttttaaggat
ttaccagaagatttcgtacaagaattactttatggtgaaaataatataatggtagaattt
atatttgagtcaaagtttggaggaagaagagaatataaagctccatttgagggtgttata
gtaaacttagaaagaagatatagggaaactaattctgaatattctagagaaaaaatagaa
gaatttatggcagaaagaccttgtccaaaatgtaaaggttcaagacttagaaaagaggtt
ttatctgtattagttgataataaaaacataatggatgtaactgatttatcagttaatgaa
cttatagactttatatcaaatataaagttaagtgaaaagcaagaatttatagctcatgaa
atactaaaagaaataaaaggaagggcttcattcttaaaagatgtaggtttagattattta
aacttatctagaaaagcaggaacactatcaggaggagaagcgcaacgtataagacttgca
actcaaattggttctgctttagtgggagttctatatgtactagatgaacctagtataggt
ttacatcaaagagataatgataagttaatagcgacgctaagacatttaacagacttagga
aatactcttatagttgtagaacatgatgaagataccatgagagaagctgactatatagta
gatataggtccaggagcaggtattcatgggggtgaaattgtaggcgagggaactcttgat
gaaattttagcaaatgaaaattcgataacaggacaatatttaagtggtaagaagcaaata
gtaattcctgaaaaaactagagaaggtaatggaagttttatagaggttgtaaaagctagt
gaaaacaatcttaaaaatataagtgtaaaattccctctaggaaaatttatatgtgtaaca
ggagtttctggatcagggaaaagtactttaattaatgatattttatatacaggtatagca
tcaaaagttaatagacttagagcaagacctggtaaacataaggaaataaaaggaattgaa
aatatagataaagtaataaatatagaccaaagtcctataggaaggactccaagatcaaac
ccagcaacttatacaggtgtatttgatcaaataagagatttatttgctgcaactaatgaa
gctaaagctagaggatataaaaaaggtaggtttagtttcaatgtaaaaggtggtagatgt
gaagcttgtaaaggtgatggtataataaaaatagaaatgcatttcttaccagatgtttat
gtaccatgtgaagtatgtaaaggtgaaagatataatagagagactttacaggtaaaatat
aaagataaaacaatagctgacgtacttgatatgaatgttgaagaagctctagaattcttt
gaaaatatacctaatataaaaagaaaacttgaaacattaatggatgttggactttcttat
ataaaattaggacagccatcaactcaattatctggtggtgaagctcaaagaataaagtta
gctacagagttaagcaaaagacctacaggaaaaactatatatatactagatgagcctact
acaggtcttcatatggcagatgtagataagcttatagatgtattacaaagattagcagat
acaggaaatactatagttgtaatagaacataacttagatgttataaaaacttgtgactat
ataatagacttaggcccagaaggtggagataaaggtggaactatagtggcacagggaact
ccaagagatgtttctaatgtagaaggatcttatacaggaaagttcttaaaaagatatttc
aagtaa
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