Romboutsia sp. CE17: HF520_14520
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Entry
HF520_14520 CDS
T06535
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
roc
Romboutsia sp. CE17
Pathway
roc03030
DNA replication
roc03430
Mismatch repair
roc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HF520_14520
03430 Mismatch repair
HF520_14520
03440 Homologous recombination
HF520_14520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roc03032
]
HF520_14520
03400 DNA repair and recombination proteins [BR:
roc03400
]
HF520_14520
Enzymes [BR:
roc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HF520_14520
DNA replication proteins [BR:
roc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HF520_14520
DNA repair and recombination proteins [BR:
roc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HF520_14520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QJA10264
UniProt:
A0A6H1X464
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All DBs
Position
2985046..2988564
Genome browser
AA seq
1172 aa
AA seq
DB search
MMSNKFVHLHVHTEYSLLDGFSRLKKLINRCKELNMDAIAITDHGCMFGAIDFYKEAKKA
GIKPIIGCEVYTAARSLNDKDPNYDKSQGHLVLLAENMTGYSNLIKMVSKSYVEGFYYKP
RVDMEELRQHSEGIIALSACLAGDVSQALMDRNYEKAKRLTLEYRDIFGKDNYFLEIQDH
NLPEQKEVNAGIIKLSKELDIPLVATNDLHYVNKEDSKIHDILMCIQMGKTVNDPSRMRF
GSDEFYLKSREEMEEIFPYAIDALDNTVKIAERCNVEFDFNTIHLPNYDVPEGYTTNSYL
RELCFKGLKERYENPNEEVIERLNYELSVIEKMGYVEYFLITWDFINYAKENNIMVGPGR
GSAAGSIVAYTLKITDIDPIKYSLLFERFLNPERVSMPDIDIDFCYERREEVIDYVKHKY
GEDHVAQIITFGTMGAKAAIRDVGRVLDIPYNKVDKIAKEIPFALGMTIDKALDTNPNLR
ELYENDAETKEIIDISKSIEGMLRHASTHAAGVVISKKPVDEYVPLYKHQDAITTQFTMT
TLEELGLLKMDFLGLRTLTVIRDALDLIEKNYGKKIDFSKMDYDDPKVYELLSSGNTLGV
FQLESAGMRSFMKQLKPDNFEDIVAGISLYRPGPMDSIPTYIENKNNPDKVKYIHESLRP
IMEVTYGCLVYQEQVMQVVRDLGGYSYGRSDLVRRAMGKKKMDVMEEERQYFIYGKKDED
GNVEIPGCISNGIPEDVANKIFDDMIDFAKYAFNKSHAAAYGVLSYETAYLKAHYPVEFM
AALITSVMGNTDKVVEYIRECNALGIDVLKPDINKSFGKFSVEGNNIRFGLAAVKNVGVN
VINNIIDEREINGTFTDFVDLVKRLDSKDTNKRVLESLIKCGAFDNISQNRASLMAGYES
LLDSISMDRKKNIQGQISLFDAFGTSNETEQFQDIYTMPKREEYEERERLNLEKEVLGMY
VSGHPLSQYKEELERKTSIDNGKLNSLKEDEEAFFSLDDREVIMGGMVVNKTIKTTKRND
IMAFIELEDLYGTIEVIVFPQILQRYNAILNEDSIIYVKGRLNIKEGENAKIIANEFKDI
NDNIDFGENKKYTAKKTSKTGLYLKIDSFSNNDLLDRIKYILLDNRGTEYVYLYADDTKQ
LYKWNGISININENVIHRLESLLPKANIKVKM
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
ataatgagcaataaatttgttcatcttcatgttcacacagaatatagtttacttgatggt
ttttcaaggttaaagaaacttataaatagatgtaaagaacttaatatggatgccattgcg
ataactgaccatggttgtatgtttggagcaatagatttttataaagaagctaaaaaagct
ggtataaaacctataataggttgtgaagtttatacagcagcacgtagtttaaatgataaa
gatccaaattacgataagtcacagggacacttagtattattggctgaaaatatgactggt
tatagcaatttaataaagatggtatcaaaatcttatgtagagggattctattataaacca
agagtagatatggaggaacttagacaacatagtgaaggaataattgctttatcagcatgt
ttagcaggagatgtatctcaagctcttatggatagaaattatgaaaaagctaaaagactt
acattagaatatagagatatatttggtaaagacaactattttttagaaatacaggatcat
aatttaccagagcaaaaagaagtaaatgctggaattataaagttgtcgaaagaactagat
ataccattagttgcaactaatgacttgcattatgtaaacaaagaagattcaaaaatacat
gatatacttatgtgtattcaaatgggaaaaacagtaaatgatccaagtagaatgagattt
ggtagtgatgaattttatcttaaatctagagaagaaatggaagaaatatttccatatgca
atagatgcattagataatactgtaaagatagcagaacgatgtaatgtagaatttgacttt
aacacaattcatcttcctaattatgatgtccctgaaggatatacaacgaatagttattta
agggaactgtgttttaaaggtctaaaagagagatatgaaaatcctaatgaagaggtaata
gaaagattaaattatgaacttagtgttattgagaaaatgggatatgtagagtatttctta
ataacatgggactttataaattatgcaaaagaaaacaatataatggttggtccaggtcgt
ggtagtgctgcaggttcaattgttgcttatacattaaaaataacagatatagatccaatt
aaatactcattattatttgagcgttttttaaacccagaacgtgtatccatgccggatata
gatatagatttttgctacgaaagaagagaagaagttatagattatgtaaagcataagtat
ggagaagatcatgttgcacaaattattacctttggaacaatgggagcaaaagcagctata
agagatgttggtagagtattagatataccatataataaagtcgataagatagcaaaagaa
ataccatttgcattaggaatgacaatagataaggcattagatacaaatcctaatttaaga
gaattatatgaaaatgatgcagagacgaaagaaataatagatatttcaaagtcaatagaa
ggtatgttaagacatgcttcaacacatgctgctggagttgttatatcgaaaaagccagta
gatgagtatgtaccactatacaaacatcaagatgcaattactacacaatttacaatgact
actttagaagaactaggtctattaaaaatggatttccttgggcttagaacacttacagta
ataagggatgcattagatttaatagaaaaaaattatggaaaaaaaatagatttctctaaa
atggactatgatgatcctaaggtttatgagcttttatcatcaggtaatacattaggagta
ttccagttagaaagtgctggaatgagaagtttcatgaagcagcttaagccagataatttt
gaggatatagtagccggaatatcactatatagaccaggtcctatggattctataccaaca
tatatagaaaataaaaataaccctgataaagttaaatatattcatgaatctttaagacct
ataatggaagtaacatatggatgtttagtatatcaagagcaggtaatgcaggtagttaga
gacttaggcggatatagctatggacgtagtgacttagttagaagagcaatgggtaaaaag
aaaatggatgtcatggaagaagaaagacaatactttatatatggtaaaaaagatgaagat
ggtaatgttgaaataccaggttgtatatcaaatggaattcctgaagatgtggctaataag
atatttgacgatatgatagactttgcaaagtatgcgtttaataaatctcatgcagcagct
tatggagttttatcatatgaaacggcatatttaaaagcacattatcctgtggaatttatg
gcagctttaataactagtgtaatgggtaatacagataaagttgttgaatatattagagaa
tgtaatgctttaggaatagatgtattaaaaccagatataaataaaagttttggtaaattt
tcagttgaaggtaataatataagatttggattagctgcagttaaaaatgttggtgttaat
gttataaataatattatagatgaaagagaaattaatggaacttttacagattttgtagac
ttagtaaaaagattggattcaaaggatacaaataaaagagttttagaaagtttaataaag
tgtggagcatttgataatataagtcaaaatagagctagtttaatggcaggatatgaatct
ttattagacagtatatctatggatagaaagaagaatatacaggggcaaatatctttgttt
gatgcttttggtacaagcaatgagacagagcaatttcaggatatatatactatgccaaaa
agagaagaatatgaagaaagagaaagactaaatttagaaaaagaagttttaggaatgtat
gtaagtggtcaccctttatcccaatataaagaagagttagaaagaaaaacctcgattgat
aatggtaaattaaactctttaaaagaagacgaagaagcatttttttctttagatgataga
gaagtaataatgggtggaatggtagttaataaaactataaaaactactaaaagaaatgat
attatggcctttatagagttagaagatttatatggtacgatagaagtaatagtatttcca
caaattttacaaagatataatgctatacttaatgaggatagtataatttatgttaaaggt
agactaaacataaaagaaggagaaaatgcaaaaatcattgctaatgaatttaaagatata
aatgataacattgattttggagaaaataaaaaatacacagctaaaaaaacatctaaaaca
gggttatatttaaagattgatagctttagcaataatgacttactagataggataaagtat
atattattagataacagaggaacggaatatgtatacttatacgcagatgatacaaaacaa
ttgtataaatggaatggcattagtataaacataaatgaaaatgttatacacagattagaa
agcttactacctaaagctaatataaaagtaaaaatgtaa
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