Romboutsia sp. CE17: HF520_14535
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Entry
HF520_14535 CDS
T06535
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
roc
Romboutsia sp. CE17
Brite
KEGG Orthology (KO) [BR:
roc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
roc03009
]
HF520_14535 (rlmD)
Enzymes [BR:
roc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HF520_14535 (rlmD)
Ribosome biogenesis [BR:
roc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HF520_14535 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
TRM5-TYW2_MTfase
MTS
Cons_hypoth95
Methyltransf_15
PrmA
RrnaAD
N6_N4_Mtase
Methyltransf_11
Methyltransf_4
PCMT
DOT1
CMAS
Ubie_methyltran
Phage_Cox
Methyltransf_23
DNTTIP1_dimer
TPMT
Motif
Other DBs
NCBI-ProteinID:
QJA10000
UniProt:
A0A6H1X3T3
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All DBs
Position
2991775..2993142
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AA seq
455 aa
AA seq
DB search
MLSKNKEYIVDIVDIGQGGVGIGKYDGFTVFVDGGLIKDKVKVKINKSKKNYAVGDIVEI
IEESPYRVKRRCNDSLKECGGCQIQELDYQKQLDIKTNEVKQVINRIGKLENVLIHETLG
MEDPIRYRNKAQFPIQKVGSNPLIGFYKKKSHDIIPTDKCVIQHEINDKIMKIIKTYINA
YKVSIYDEKTHTGVLRHLVTKIGFTTNEVMVVLVANGRKLPYLKELASVLEENVPGFKTL
VVNVNREKTNVILGKENIVVYGDGKINDYIGDLVFEISPLSFFQVNPAQTEVLYNKALEY
ADLKENDTVFDIYCGIGTISLFLAQKAKKVYGIEIVEDAIKDAKINANLNKLDNVEFYVG
KAEEVVPKMYKEGKTANVVVVDPPRKGCDEKVLDTIVSMKPDRVVYVSCNPSTLARDLAY
LDERGYKCLEIQPVDMFPHTMHVECCAKIVKKSDL
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcaaaaaataaagagtatatagtagatatagttgatataggtcaaggtggcgtt
ggaataggtaaatacgatggttttacagtatttgtagatggcggactaataaaagataaa
gtaaaagtaaaaatcaataaatcaaagaaaaattatgctgtaggagatatagttgagata
atagaagaatcaccatacagagtaaagagaagatgcaatgatagtttgaaagaatgcgga
ggatgccaaattcaagagttggattatcaaaagcagcttgatataaaaactaatgaagtt
aaacaagtaataaataggatcggaaaattagaaaatgtattaatacatgaaactctaggt
atggaagatccaataagatatagaaataaagctcaattcccaatacaaaaggttgggtca
aaccctttaataggattctataaaaagaaaagtcatgacataatacctactgataaatgt
gttatacagcatgagataaatgacaaaattatgaaaataattaaaacttatataaatgca
tataaagtaagtatttatgatgaaaaaactcatactggagttttaagacatttagtaaca
aagataggatttacaacaaatgaagttatggtagttctagttgcgaatggaagaaaatta
ccatatttaaaagagttagcatcagttttagaagaaaatgttcctggatttaagacatta
gttgtaaatgtaaatagagaaaaaacaaatgttatcttaggcaaagaaaatatagttgtt
tatggagacggaaaaataaatgattatataggagatttagtttttgagatatctccacta
tcattcttccaagtaaatcctgctcaaactgaagttttatataataaggctttagagtat
gcggatttaaaagagaatgatacagtatttgatatatattgtggaataggtactatatca
ttattcttggctcagaaggctaaaaaagtatatggtatagaaatagtagaagatgcaata
aaagatgctaaaataaatgctaacttaaataaactagataatgttgagttttatgttgga
aaagcagaagaagtagttcctaaaatgtataaagaaggtaaaactgcaaatgtagtagtt
gtggatccaccaagaaaagggtgtgatgagaaggttcttgatactatagtttcaatgaag
ccggatagagttgtgtatgtttcttgtaacccatctactttggctagagatttagcttat
ttagatgaaagaggttataagtgtttagaaatacaaccagtggatatgttcccacataca
atgcacgttgagtgctgtgcgaagatagttaagaagtctgatttataa
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