Romboutsia sp. CE17: HF520_15020
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Entry
HF520_15020 CDS
T06535
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
roc
Romboutsia sp. CE17
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA
Mg_chelatase
AAA_2
AAA_5
HTH_50
HTH_22
HTH_7
AAA_19
DUF815
GAF_2
PAS_8
PAS_9
DUF134
HTH_30
AAA_3
Suv3_N
AAA_16
NPV_P10
PAS
Xre-like-HTH
zf-C5HC2
Motif
Other DBs
NCBI-ProteinID:
QJA10089
UniProt:
A0A6H1X3P1
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Position
3091339..3093120
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AA seq
593 aa
AA seq
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MITMNSLEYIKEDIQNIAEAILAVLDIDVTIVDDKLIRIAGTGRYIDKIGEKLDGYSAFK
KSLQEQVSIIIDDPHVSTICKECDNKLYCKEHAEVCCPIMLDGYTYGVIGLIAFTESQRN
IIKNNKDGLLNFLGKMADLISNKLKAQIKADELEFEKKKLEILIDSMDKAIVSIDVNGYI
DRYNSKFKKMFSLNNIDIENKSIVNVLDFINEPLNKDFKKYKSGMFFYRKGSYEIKGIYN
INKIIVKDKLKGYVIDFIDKREAIKNYNRINKDYKIILDNIIGESNLIKSIKKEAFIASK
SSSTVLISGESGTGKELFARAIHNHSNRVDNPFIAVNCAAIPDNLLESELFGYEEGAFTG
AKKGGKLGKFELAHKGTIFLDEIGDMSLHLQAKLLRVLQEKELDKIGGKTNVSIDVRIIA
ATNKDLEDMVSKGNFREDLYYRLNVIPIHLPSLRERKEDIPLLIDFTIKEYSKKLGKNVE
YVDKDVLKVMINYKWPGNIRELQNIIEYSINMSSSSVITLDVIPQKLKNNSCHEAIEKSG
EIRTLDNLEKEEIIKALNKFKDYKKDKELAAKALGISRATLYRKLEKYKIVSK
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgataactatgaatagtttagaatatataaaagaagatattcaaaatattgcagaggcc
atattagccgttcttgatatagatgtaactatagttgatgataaattaataaggatagct
ggtacaggtagatatatagataaaataggtgaaaagttagatggatattctgcatttaaa
aaatctttacaagaacaggtatctataattattgacgacccccatgttagtacaatatgt
aaagaatgtgataacaaactttactgtaaagaacatgcagaagtttgttgtcctattatg
ctagatggttacacttatggggttattggattaattgcatttacagaatctcaaagaaat
attataaaaaacaacaaagatggacttttgaatttcttaggtaaaatggcagatttgata
tctaataaattaaaggcgcaaataaaagctgatgaacttgagtttgagaagaaaaagctt
gaaatacttatagatagtatggataaggctatagtatctattgatgttaatggctatata
gatagatacaactctaagtttaaaaaaatgttcagcttaaataatatagatatagagaat
aaaagtatagtaaatgttttagattttataaatgagcctcttaataaggattttaaaaaa
tataaatcaggtatgttcttttatagaaaaggatcttatgaaataaagggaatttataat
ataaacaaaatcatagtaaaagataaattaaaaggttatgtaattgactttatagataag
agagaagcaattaaaaactacaatagaataaataaggactataaaataatattagataat
attattggtgaaagtaatttaataaaaagtataaaaaaagaagcttttatagcttcaaaa
tctagttcaacagttttaataagcggagaaagtggtacaggaaaagagttatttgcaaga
gcaattcataatcatagtaatagagtagataatccttttatagctgtaaattgtgcagca
ataccagataaccttttggaaagtgaattatttggatacgaagagggagcatttacagga
gctaaaaaaggtggaaaactaggtaaatttgaattagctcataaagggaccatattttta
gatgaaataggcgatatgagccttcatcttcaagcaaaattacttagagtattacaagaa
aaagagcttgataaaataggtggaaaaacaaatgtatctatagatgtaagaattattgca
gctactaataaggatttagaagatatggtatctaaaggaaactttagggaagatctatat
tatagattaaatgttattccaatacatttaccaagtttaagagagcgaaaagaggatata
ccattattaatagattttacaataaaagagtattcgaagaaattaggaaaaaatgtagag
tatgtagataaagatgttttaaaagtgatgataaattataagtggccagggaatataaga
gagcttcaaaatataattgaatatagtattaatatgtcttcatcatctgtaataacttta
gacgttattcctcaaaaattaaaaaataatagctgccatgaagctattgaaaagtctggt
gaaattagaactttagataatttagaaaaagaagaaattataaaagctttaaataaattt
aaagattataaaaaagataaagaattagcggcaaaggctctaggtatatcaagggcaact
ttatatagaaaattagaaaaatataaaatagtctcaaagtga
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