Romboutsia sp. CE17: HF520_15090
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Entry
HF520_15090 CDS
T06535
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
roc
Romboutsia sp. CE17
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
AAA
AAA_5
AAA_2
GAF_2
HTH_7
Mg_chelatase
HTH_8
AAA_19
ATPase
GAF
FMP23
nSTAND3
AAA_7
PAS_10
bpMoxR
DUF6973
AAA_22
AAA_3
AAA_16
PAS
Motif
Other DBs
NCBI-ProteinID:
QJA10103
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Position
3104942..3106747
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AA seq
601 aa
AA seq
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MESKLKPFQNYLEKHTKIISSILNIDIEIVDDKLIRLNGSGIYKNKVNESVISGGNIYSQ
VLETGREVVVLDIESNSICNRCNNIQKCLNKVIIAVPIKYKGQTLGVIGAITTDPQKKID
IKEKIDSYLPFIGNICDLISLKIEEVEVNKNNNKKMVLLHEIINNVDKSIVILDSQNKIS
YINNKANTSFDLKNNGIGLELNIVNYEKSTNNKEVINIDINNKIYNTIAKIIPVYPYIKN
YDKIIIFDKILKDRNEKKDYANSMWGVSKCDSIIGNSEIMCKVKNRIKKLAKSNSTVLIT
GESGTGKELIARAIHAEGNRSDKPFIAINCAAIPENLLESELFGYVKGAFSGASSSGKIG
KFELANEGIIFLDEIGDLSIHLQAKLLRVLQERKFARVGSNKLIDLDIKVISATNKDLLK
LVNEGKYREDLYYRLNVIPINLPPLRERVDDIDDIMNSFISKYSKELGISNVRIDKKVIE
MIKNYNWPGNIRELENAVEYMMNLVGEDGIIIEDMLPVDILNYYKNNKLKESKNENYSDM
CINIEEQIDLNNGKILSLKDLELIYINKLLDRYGRDTKTKKDIAKNLGIGLATLYRKLEE
G
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggagagtaagttaaaaccatttcaaaattacttagaaaagcacaccaaaatcatatca
agcatactaaatatagatatagaaatagtagatgacaaattaattagattaaatggaagt
gggatttataagaataaagttaatgaaagcgttatttcaggaggaaatatatatagccaa
gttcttgaaactggaagagaggttgtcgttttagatatagaaagcaactcaatttgtaat
agatgtaataatatacaaaaatgtttgaataaagttattatagctgttcctataaaatat
aaaggtcaaactctaggtgtaataggcgctataactactgatccacagaagaaaatagat
ataaaagaaaaaatagattcttatttaccttttataggaaatatatgtgatttaatttct
ttaaaaatagaggaagttgaagttaataaaaataataataaaaaaatggtattgctacat
gagattattaataatgtggataaaagtatagttatcttagatagtcaaaataaaatttct
tatataaataataaagcaaatacatcttttgatttaaaaaataatggtattggattagag
ttaaacatagttaactatgaaaaatcaactaataataaggaagtaattaacatagatata
aataacaaaatatataacacaatcgcaaagataatacctgtatatccttacataaagaat
tatgataagattataatttttgacaagattttaaaagatagaaatgagaaaaaagactat
gcaaattctatgtggggagtaagtaaatgtgattctataattggaaattccgaaattatg
tgcaaggtcaaaaatagaattaaaaaattagcaaaatcaaattccacagtattgattact
ggagaaagtggaactggaaaagaattaattgctagagctatacatgctgaaggaaataga
agtgataaaccttttatagcaataaattgtgctgctattcctgaaaacttattagaaagt
gagctttttggatatgtaaaaggagcatttagtggtgctagtagtagtggtaagataggg
aaatttgagttagccaatgaaggtataatttttttagatgaaataggtgatttatcaata
cacttacaagcaaaattattaagggtattacaagaaagaaaatttgcaagggtagggtct
aataaacttatagatttagatataaaggttatatctgctactaataaagatttattaaaa
ttagttaatgaaggcaaatacagagaagatttatattacagactaaacgttataccaata
aatcttcctccattaagagagagagtagatgatatagatgatataatgaattcatttata
tctaaatactctaaagaattaggaatttctaatgtaagaattgataaaaaagtcatagaa
atgataaaaaattacaattggccgggaaatataagggaattagaaaatgcagttgagtat
atgatgaatttagtcggagaagatggaattataatagaagatatgcttccagtagatata
ttaaattattacaaaaataacaaacttaaagaatctaagaacgaaaattatagtgatatg
tgtataaatatagaggaacagattgatttaaataatggtaaaatattatctcttaaagac
ttagaattaatatatataaataaattattagacagatatggtagagataccaagacaaaa
aaagatatagctaaaaatcttggaataggattagcaactttatatagaaagttagaagaa
ggttaa
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