Rossellomorea sp. DA94: P8596_01430
Help
Entry
P8596_01430 CDS
T10138
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
rod Rossellomorea sp. DA94
Pathway
rod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8596_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rod03019
]
P8596_01430
03009 Ribosome biogenesis [BR:
rod03009
]
P8596_01430
Enzymes [BR:
rod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
P8596_01430
Messenger RNA biogenesis [BR:
rod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8596_01430
Ribosome biogenesis [BR:
rod03009
]
Prokaryotic type
rRNA helicases
P8596_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
GRP
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WGG45924
LinkDB
All DBs
Position
258428..259939
Genome browser
AA seq
503 aa
AA seq
DB search
MTKFADLNLSASTLKSIKRMGFEEATPIQASTIPVGLEGKDIIGQAQTGTGKTTAFGIPM
IEKIDVKNPKVQALIIAPTRELAIQVSEELYRIGADKRARVLSVYGGQDIQRQIRAMKKN
PHIIVGTPGRLLDHIKRKTLNLENVETLVLDEADEMLNMGFIEDIESILETVPSTRQTLL
FSATMPDPIRRIANRFMSEPEVIKVKSKEVTVSNIEQYFTKVSEKEKFDTLSRLIDVQSP
ELAIVFGRTKRRVDELARALSIRGYLAEGIHGDLSQARRMTVLKKFKEGRIDILIATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKKGMSITFVTPREMGYLKIVEQTTK
KKMTALKPPSLNEALEGQQRLALEKLVEAAKESDLKDYYPLAEEFLGDHDPVQAVAAAIR
VLTKEPDTTPVEITEERPLPSRGGNRGGGNRGGYKGGARSGSRGGSSRSGGGNRGGGSRG
GDRNRSGGGRPQSSSKRKSYNNS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
ttgactaagtttgcagatttaaacttaagcgcatctacgttgaaatcaattaaacgtatg
ggctttgaagaagcaacaccaattcaggcgagtacgattccagtcggtttagaaggtaag
gatatcatcggtcaggcacaaacaggaacagggaaaacgacagcgttcggtattccaatg
atcgagaaaatcgatgtaaagaaccctaaagttcaagcattgatcattgcaccaacccgt
gaacttgccattcaggtttctgaagagttataccgtatcggtgctgacaagcgtgcccgt
gtactatccgtatatggaggccaagacatccagcgtcaaatccgtgcgatgaaaaagaac
cctcatatcatcgtcggtacaccaggccgtcttcttgaccatatcaaacgtaaaacactt
aaccttgaaaacgttgagacacttgtacttgacgaagcagacgaaatgttgaacatgggc
ttcatcgaggatatcgaaagcatccttgagacagttccaagcacaagacaaacacttcta
ttctctgccacaatgccggatccaatccgccgcattgccaatcgtttcatgtcagagccg
gaagtcatcaaggttaaatcaaaagaagtaacggtttcaaacattgaacagtacttcacg
aaagtaagcgaaaaagaaaaattcgatacactttcccgtttaatcgacgtgcaatcacct
gagcttgcgatcgtattcggtcgtacaaaacgcagagttgacgaattagcacgtgctcta
agcatccgcggctacctggctgaaggtattcacggagatctttctcaagctcgtcgtatg
acagttcttaagaaattcaaagaaggccgcatcgatatcctgatcgcaacagacgttgct
gcccgtggattagatatctcaggcgtaacgcatgtttacaactttgacattcctcaagat
cctgaaagctacgttcaccgtatcggacgtacaggtcgtgcaggtaagaagggtatgtcc
atcacttttgttacaccaagagaaatgggttacctgaaaattgttgaacaaacaacgaag
aagaaaatgacggcccttaagccacctagcttaaacgaagctcttgaaggtcaacaacgc
ctggctttagagaagctggttgaagctgcgaaggaaagcgatcttaaagattactatcca
ttagcagaagaattcctaggcgatcacgatcctgttcaagcagtagcggcagcgatccgt
gtattgacgaaagagcctgatacgactcctgtagagattacggaagaacgtccactacca
tcaagaggtggaaatcgtggcggcggtaaccgtggtggatacaaaggtggagcacgcagc
ggaagtcgcggtggatcttcacgcagcggcggtggaaatcgcggaggcggaagccgtggc
ggagaccgcaaccgttctggcggcggcagaccacaatcttcaagcaaacgtaaatcttat
aacaattcttga
DBGET
integrated database retrieval system
