Rossellomorea sp. DA94: P8596_09990
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Entry
P8596_09990 CDS
T10138
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rod Rossellomorea sp. DA94
Brite
KEGG Orthology (KO) [BR:
rod00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rod03032
]
P8596_09990 (topA)
03400 DNA repair and recombination proteins [BR:
rod03400
]
P8596_09990 (topA)
Enzymes [BR:
rod01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
P8596_09990 (topA)
DNA replication proteins [BR:
rod03032
]
Prokaryotic type
DNA Topoisomerases
P8596_09990 (topA)
DNA repair and recombination proteins [BR:
rod03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
P8596_09990 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
WGG47505
LinkDB
All DBs
Position
1918306..1920381
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVRASMGHVRDLPKSQMGVDVENEFEPKYITIRGK
GPVLKELKTAAKKVKRIFLAADPDREGEAIAWHLAHSLDMDTTSECRVVFNEITKDAIKE
SFKHPRAINMDLVDAQQARRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREN
EIKAFTPEEYWSIEAEFTKGNDTFQASFYGIDGKKVELKNEEEVKDVLGKVKGKSFEVNK
VTKKERKRNPAPPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIEMGKQGTVGFITYMR
TDSTRISEVAQKEANEYIVNKYGEDFIKQSERKEKKQQKAQDAHEAVRPTSTLRDPSSVK
QFLSRDQYRLYKLIWERFVASEMAPAIMDTMSVDLVNGSVMFRASGSKVKFPGFMKVYVE
GSDDQKEEKDNFLPALEENDKVKSENIDPNQHFTQPPPRYTEARLVKTLEELGIGRPSTY
APTLDTIQRRGYVTLDNKRFIPTELGEIVLELVREFFPDIIDVEFTANMERSLDDIEDGN
VKWERIIDRFYQDFEKHLEKAENEMEKIEIRDEPAGEDCEECGHAMVFKMGRYGKFMACS
NFPDCRNTKPIVKEIGVKCPKCEKGNIIERKSKKKRIFYGCDQYPECDFLSWDKPIERKC
PKCSELLVEKKLKKGNQIQCTNCDYKEEPQK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtaatagtggaatcgccggctaaggcgaaaacgattgaacgttat
ttaggtaaaaaatataaggtcagggcatcaatgggacacgtcagggacttgccaaaaagt
cagatgggcgtcgatgtcgaaaatgaattcgaaccaaagtatatcaccatacgcggtaaa
ggacccgtattaaaagaattaaaaaccgctgcgaaaaaagtgaaaagaatctttctggct
gccgaccccgacagagaaggggaagcaattgcatggcacttggctcatagccttgatatg
gataccacgtcagaatgccgggtcgtattcaacgaaatcacgaaggatgcgatcaaagaa
tcattcaagcacccacgtgcaatcaatatggacctagtggatgcccagcaggcaagaagg
atcctggaccggttagttggttacaacatcagcccattattatggaaaaaggtgaaaaag
ggactaagtgcaggtcgggtccagtccgttgcggtccggttgatcatcgacagggaaaat
gaaatcaaagccttcactccggaagagtattggtccatcgaagcggaattcacaaaaggt
aacgatacatttcaggcatcattttatggcattgacggtaaaaaggtggaattgaaaaac
gaagaagaagtaaaggatgttcttggtaaggtgaaagggaagtctttcgaagtgaataaa
gtcacaaagaaagaaagaaagagaaatcctgcaccaccgtttactacttcatcactccag
caggaggcagcccgtaaattgaatttccgggcaaagaagacgatgatgcttgcacagcaa
ttatacgaaggaatcgaaatggggaaacaaggaactgtcggatttatcacatacatgaga
acggactccacccggatttctgaagtagctcagaaagaagccaatgaatatatcgtgaat
aaatatggcgaggattttatcaagcagtctgagcgtaaagagaaaaaacagcaaaaagcc
caggatgcccatgaagccgtccggccgaccagtaccctgagggatccgtcatcggttaag
cagttcctttcaagagaccagtatcgcctgtataaattgatttgggaacgtttcgtagcg
agtgagatggcacctgcgatcatggatacgatgagtgtagatctcgtaaacggctccgtc
atgttcagggcatcaggttcgaaagtgaaattccccggttttatgaaagtatacgtcgag
gggtcggatgatcaaaaagaagaaaaggacaatttccttccagcacttgaagaaaacgat
aaggtgaaaagtgaaaacattgatccaaatcagcatttcacacagccgccgccaagatac
accgaggcaagactcgtcaaaacattggaagaactcggtatcggaagaccgtccacatac
gctcctacacttgatacgattcaaaggagagggtacgttactctggataacaagcgattt
atcccgacggaacttggagaaatcgtgttagagttagtgagggaattctttcctgatatc
atcgatgtcgagttcacggctaacatggaacggagcctggatgacattgaggatggcaat
gtgaagtgggaaagaatcattgaccggttttatcaggattttgaaaagcatctcgaaaaa
gcggaaaatgaaatggagaaaattgaaatccgtgatgaacctgccggtgaagactgtgaa
gaatgcggtcacgcaatggtattcaagatgggacgatacggcaagttcatggcatgcagc
aattttcctgattgtcgtaataccaagccgatcgtgaaagaaatcggtgtgaaatgtcct
aaatgtgaaaaagggaatatcatcgagcgtaaaagcaagaaaaagcgtattttctacggg
tgtgaccagtatcctgaatgtgatttcttatcatgggataaaccgattgaacggaaatgt
ccgaaatgttcagagctgctcgtggagaagaagcttaaaaagggtaatcaaattcaatgt
acgaattgtgattataaagaagaacctcagaaatag
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