KEGG   Rossellomorea sp. DA94: P8596_10330
Entry
P8596_10330       CDS       T10138                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
rod  Rossellomorea sp. DA94
Pathway
rod03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rod00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P8596_10330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rod03019]
    P8596_10330
Messenger RNA biogenesis [BR:rod03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     P8596_10330
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C RMMBL Lactamase_B Lactamase_B_2 Anti-Pycsar_Apyc1 CopK
Other DBs
NCBI-ProteinID: WGG47968
LinkDB
Position
1987024..1988691
AA seq 555 aa
MSKIKNESIKVIPLGGVGEIGKNMYVIEVDHEIFVIDAGLMFPENEMLGIDVVIPDIQYL
IENKERVKGIFLTHGHEDSIGAISYVLTKIKAPVYGTRLTNALVKARLKDEHIRDDVKFY
TIHSDSNLTFDGVNVTFFKTTHSIPDSVGVCIHTSEGVIVHTGEFKFDQSAKHLYRPDLG
KMAQIGEKGVLCLMSDSKEAERPGFTTSESVIEQHITNALRKASGRVIVACFASNLIRLQ
QVFDAAEQNNRKVAVVGKSLKRVYDVALKLGYLHVRDEMIIGIDEIEDYPKDEVLIIATG
TQGEPFEALQRMSKRSHRLVNIEEGDTVLITATPSPGMEVIVGRTIDMLYRAGANVLTAS
KKVHVSGHGSQEDLKFMLNIMKPKYFIPIQGEYKMLVAHTQLAHDTGLPYKQIFIMDKGD
VLQYKDGKMRMSGRVQAGNVLIDGIGIGDVGNIVLRDRKLLSEDGVFTVVITINRRSKSI
VSGPEIISRGFVYVRESEELIDGAGGIVTDVVHSYLQKGSFEWTAIKQDIRDQLNYYLFN
KTRRRPMILPIIMEV
NT seq 1668 nt   +upstreamnt  +downstreamnt
gtgagtaagataaagaatgaaagcattaaggtgataccactcgggggagtgggagagata
ggcaagaacatgtacgtgattgaagtcgaccatgaaatattcgtgattgacgcaggactt
atgtttcccgaaaatgaaatgctagggatcgatgtcgtcattcctgacattcaatatttg
attgaaaataaagagcgggtaaaagggattttcctgactcatggacatgaagacagtatt
ggtgcgatttcatatgtattaaccaagatcaaggctccagtctatggaacacgcttgacg
aatgcactggtaaaagcacgtctgaaggatgaacatatcagggatgatgtgaagttctat
acgattcattctgatagcaatcttacttttgatggtgtgaatgtgacgttctttaaaacc
acacacagtattcctgattcagtcggggtttgcatacatacatctgaaggggtcatcgtc
catactggcgaattcaagttcgatcaatcggcaaagcatctttaccggccggatttagga
aagatggcgcaaatcggtgagaagggtgtcctttgtctaatgtctgatagtaaagaagcc
gagagaccagggtttacaacatcagagtcggtaatcgaacaacatatcacgaacgccctg
aggaaagcatcagggagagtgatcgtagcatgcttcgcttcgaatttaattcgacttcag
caggtatttgatgcagctgagcagaataatcgaaaagtggctgtggtcgggaagagttta
aagagagtctatgatgtggccttgaagctcggataccttcatgtccgggatgaaatgatc
atcggaattgacgaaatagaggattatcctaaagatgaagtcctcatcatagctacagga
actcaaggggaaccgtttgaagcgcttcaacggatgtccaagcgttcccatcgtctagta
aacattgaagaaggtgatacggtcctcataaccgccacgccttccccaggcatggaagtg
atcgtcgggaggacgatcgatatgctttatagagccggggcaaatgtattgaccgcgtcg
aaaaaagttcatgtgtcaggtcatgggagtcaggaagacttaaagttcatgttgaatatc
atgaaaccaaagtacttcataccgatccagggtgaatataaaatgctcgtcgctcatacc
cagctcgcccacgataccggactgccttataagcagatctttatcatggataagggagac
gtgcttcaatataaggatggtaagatgagaatgagcggccgtgttcaggcgggaaatgta
ttgatcgatgggatcggtatcggggacgtagggaatattgtccttcgtgatcgtaagctg
ttatcggaagacggtgtgtttacggttgtcatcaccatcaacagaaggtccaagtctatc
gtctcaggacctgaaatcatctccaggggattcgtatatgttagagagtccgaggaattg
atcgatggggcagggggaatcgtgacggatgtggtccattcctatctgcaaaaaggttct
tttgaatggacggcaatcaagcaggacatccgggatcaattaaattattacctatttaac
aaaacacgaagaagaccgatgattctaccgatcatcatggaagtataa

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