Rossellomorea sp. DA94: P8596_15950
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Entry
P8596_15950 CDS
T10138
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
rod Rossellomorea sp. DA94
Pathway
rod02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rod00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
P8596_15950 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rod03021
]
P8596_15950 (rpoD)
Transcription machinery [BR:
rod03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
P8596_15950 (rpoD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
DUF2316
Motif
Other DBs
NCBI-ProteinID:
WGG44262
LinkDB
All DBs
Position
complement(3046946..3048076)
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AA seq
376 aa
AA seq
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MAEKSARSKQIASELTVDQVKEFLVNQGKKRGVLTYEDIADKLSGFELDSDQMDEFYEHL
GEQGVEIVNESDEDDDPGATELEKEEEEEFNLNDLSVPPGVKINDPVRMYLKEIGRVDLL
SAEEEINLAKRIEDGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAV
EKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGR
EPAPEEIAEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDAEAQSPSEHAA
YELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALR
KLRHPSRSKRLKDFLE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagtcagcgcgttccaaacaaatagcgtcagaattaacagttgatcaggtg
aaagaatttttagttaaccaaggtaagaaaagaggagtcctcacatacgaagatattgca
gataaattatccggcttcgaattggattccgatcaaatggatgaattctatgaacactta
ggtgagcagggtgtagaaatcgttaatgaaagtgacgaagatgatgatccaggtgccacg
gagttagagaaggaagaggaagaagaatttaatctaaatgatttaagcgttcctcccggg
gttaagataaatgatcctgtacgtatgtacctgaaagaaattgggagagtcgatttactt
tctgcagaggaagagatcaatcttgccaagcgaattgaagatggtgatgaggaagccaag
cgacgtctggcagaagcgaacctgagactcgttgtcagtatcgcaaaacgctatgtaggc
cgcgggatgctattcttggatctgatccaggaaggtaacatgggtctgattaaagcagtg
gaaaagtttgattaccggaaagggtacaaattcagtacgtatgcgacttggtggattcga
caagccatcacccgtgccatcgcggaccaggcaagaacgatacgtatcccggttcatatg
gttgagaccattaataagctgattcgcgtacaaagacaattacttcaagatttgggtcgt
gaacctgcaccggaagaaattgctgaagaaatggatctgactcctgaaaaggttcgtgaa
attcttaagatcgctcaagaacctgtatcccttgaaacaccaattggtgaagaagacgat
tctcaccttggggacttcatcgaggatgcagaagctcaatctccttcggaacatgcagct
tacgaattgttgaaagaacagcttgaagatgtcctggatactcttacagaccgggaagaa
aatgttctacggttacgttttggtctggatgacggcagaacacgtacactggaagaagtg
ggtaaagtgtttggtgttacccgggaacgtatccgtcaaatcgaagcgaaagcccttcgg
aaactgcgccatccaagcagaagcaaacgattgaaagactttttggaatag
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