Rossellomorea sp. DA94: P8596_17245
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Entry
P8596_17245 CDS
T10138
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rod Rossellomorea sp. DA94
Pathway
rod03030
DNA replication
rod03430
Mismatch repair
rod03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P8596_17245 (dnaE)
03430 Mismatch repair
P8596_17245 (dnaE)
03440 Homologous recombination
P8596_17245 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rod03032
]
P8596_17245 (dnaE)
03400 DNA repair and recombination proteins [BR:
rod03400
]
P8596_17245 (dnaE)
Enzymes [BR:
rod01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P8596_17245 (dnaE)
DNA replication proteins [BR:
rod03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P8596_17245 (dnaE)
DNA repair and recombination proteins [BR:
rod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P8596_17245 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
WGG44499
LinkDB
All DBs
Position
complement(3313509..3316859)
Genome browser
AA seq
1116 aa
AA seq
DB search
MSFVHLQIASAYSLLSSTISINGLVHKAKESGYRALAMTDKNMMYAAIPFYKACVKENIK
PIIGLTADIASEEGSHPLVLLVKDQSGYQNLLKISSAIGAKSKEGLPLKWLSSYSKGLIA
ITPGVKGEIENLLLNDEKEKAKECIRTYQQMFGRDSFYLSIQKHGIASEDSLIPLLQKIA
EETGSEMVATNDVQYLEQEDHFAHECMAAIRDGVKLSEDDRDVLESQEYYFKNKDQMVEL
FSDHVEALENTMKIADRCHLTIPFHQQLLPKYPLPEGVTALEELTHLCEKGLSERVETVT
DEYIERLDYELEVIGRMGFSDYFLIVWDFMKYAKDKKILTGPGRGSAAGSLVSYALRITD
VDPLEHHLLFERFLNPERVTMPDIDIDFPDHRRDEVIEYVEGKYGSLHVAQIITFGTFAA
KAALRDTGRVFGLNMKEQEQVSKLVPNQLGITLKEAYEKSKGFRDFVTGSDHYKKLFQTA
LKLEGLPRHTSTHAAGVVMSEAPLVQWVPIQGSSSGIHLTQYSMDILEEIGLLKMDFLGL
RNLSILERIVKNVEIGTGKPFAIESIPMNDAKTFDLLTKGQTNGIFQLESDGMRNVLKRL
KPNSFEDIVAVNALYRPGPMENIPMYINRKHGKEQVEYPHPDLKPILEMTYGVIVYQEQI
MQIASKMAGFSLGEADLLRRAVSKKKKDVLDQEREHFVSGSIRKGYREEVAHTIYDLIVR
FADYGFNRSHAVAYSMIAYQLAYLKAHYPAFFLSSLLTSVVGNETKVAQYIREATQYDIG
ILPPSINRSQFVFTVEGKNVIRYSIGAIKGIGAAALKEIIRARKEKPFQDLFDFCMRVSS
KTINRKILENLVLSGAFDEFGIDRATLLASLDVAAQHAELVNPDDDLDLFHEEEAFMLKP
KYVEVDDMTIDTKLQFEKQVLGLYLSDHPVSSYRPLFEGMGLQQIADLQKGSKISLGGYI
TGMKSIRTKKGEVMAFLEIGDESGEMEAVVFPNVYKHNMPLLKEGNILLFGGNVEDRNDK
LQFIVNQLETMEDVQERVKESSQKLYLKIAAGQDEEACMEGIHRAINRFKGKNPVIVYNE
QAKKSIRLPDHLRISPSQEALRELYRILGESNVILQ
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgttcatttacaaatagcgagtgcctatagtctcttgtctagcacgatatcg
ataaatggacttgtacataaagcgaaggaatcagggtacagggcgcttgccatgaccgat
aaaaatatgatgtatgccgcgatccctttttataaggcgtgtgtaaaagaaaacatcaaa
ccgatcatcggattgaccgcagatattgcctcggaggaaggttcccaccccctcgttctc
ctcgtgaaagatcaaagtggctatcagaacctattaaaaatctcgagtgccatcggagca
aagtcgaaagaaggattaccgctgaagtggctctcttcctacagtaagggattgatcgcc
atcactccaggcgtcaagggtgagatagagaacctgttattgaatgatgaaaaagaaaaa
gctaaggaatgtatccgcacctatcaacagatgttcggtcgggattccttttacttaagc
attcaaaagcacggcattgcctctgaggattcgcttattcctttactgcagaagatagcg
gaagagaccggttcggaaatggtcgctaccaatgatgtacagtacctcgagcaggaagat
cattttgcccatgagtgtatggcggcgatccgggacggggtgaaactgtctgaggatgac
cgggacgtcctggaatcacaggagtattacttcaagaacaaggatcagatggtggaacta
ttctctgatcatgttgaggcattggaaaatacaatgaagattgccgaccgctgccatctg
accattccttttcatcaacagctccttccgaaatatcctctgcctgaaggagtcaccgcc
ctcgaggaattgacgcatctttgtgaaaaagggttaagcgagcgggtcgaaacggtaact
gatgagtatatcgagcggttggattatgagcttgaagtcatcggcaggatggggttcagc
gactacttcctgattgtgtgggatttcatgaaatacgcgaaggacaaaaagatcctgacc
ggaccgggacgtgggtcggccgcaggttccctcgtatcctacgccctcaggattacggac
gtggatcctttggagcatcatctgctgtttgaacgattcctgaatccagaacgggtgacc
atgccggatatcgacatagatttccctgatcaccggcgcgacgaagtgatcgagtatgtg
gaagggaagtacggcagccttcatgtcgcccagatcatcacgttcgggacgtttgcagcg
aaagcggctctccgtgatacgggtcgtgtgtttggactcaatatgaaggagcaggagcag
gtgtcgaagctcgtgccgaaccagctcggaatcactttgaaagaagcctatgaaaagtcg
aaggggtttcgcgactttgtgacgggctctgatcattataaaaaattgttccagactgct
ctcaagcttgaaggactaccgaggcacacctccacccacgcggcgggagtcgtgatgagt
gaagcacctttagtacagtgggtaccgatccaggggagttcatcggggattcacctgaca
cagtactctatggatattttagaagaaattgggttgttgaagatggatttccttgggctt
cgcaatctgagtatattggaaagaatcgtgaagaatgttgaaatcgggacgggaaaaccg
tttgccatcgagtcaatcccgatgaatgatgccaaaacgttcgatctgctcactaaaggg
cagacgaatgggatcttccagctggaatcggatgggatgcggaatgtgttaaaaaggctg
aaacccaattcctttgaagacatcgtggcggtgaacgccttgtaccgtccgggtccgatg
gagaacatcccgatgtatatcaaccggaaacatgggaaagagcaggtggaatatcctcat
cccgatttgaaaccgatccttgaaatgacgtatggggtcattgtgtatcaggagcagatc
atgcagatcgcttcgaaaatggccgggttctccctcggggaagcggatctcctcaggcga
gccgtttccaagaagaaaaaggatgtcctcgatcaggaacgggagcattttgtttccggt
tcgatacggaaaggctacagggaagaggtcgcccatacaatttatgatttgatcgtccgc
ttcgcagattatggattcaaccggtcacatgccgttgcatacagcatgatcgcctatcaa
ctggcttacctgaaagcccattatcctgcgttcttcttatcgtcactcctgacatctgtc
gtaggaaatgaaacgaaggtggctcagtatatacgggaagccacacagtatgacattgga
atcctgcctccttccatcaatcgcagtcagtttgtttttacagtcgaaggaaagaatgtg
atccgctacagcataggggcgattaaaggaattggggccgcggctcttaaggaaatcatc
cgtgcgagaaaagaaaagccgtttcaggatctcttcgatttctgcatgagggtgtcctcg
aagacgatcaaccggaagatcttagagaatcttgtgctctccggggcgtttgatgaattc
gggatcgaccgcgcaaccttgcttgctagcctggatgtggcagcgcaacatgcagagctt
gtgaaccctgatgacgatcttgacctgttccatgaagaagaggcgtttatgttaaagccc
aaatatgtggaagtggatgacatgacgatcgatacgaagcttcagtttgaaaaacaggta
cttggactctacttatcggatcacccggtttcttcttaccggcctttattcgaaggaatg
ggattgcagcagatagccgatcttcaaaaaggatcgaaaatctcactcggcggttatatt
accgggatgaaatcgatccggaccaagaaaggggaagtgatggctttccttgaaatcggg
gacgagagcggagagatggaagccgttgtgtttccgaatgtgtacaaacataatatgccg
ttgctcaaagaagggaatattctcctattcgggggcaatgtggaagaccgcaacgataag
cttcagttcatcgtgaatcagttggaaacgatggaagacgttcaggaaagggtgaaagag
agcagccagaagctatatttgaaaatcgccgcgggtcaggatgaagaggcctgtatggag
gggatccatcgagccattaaccggttcaaagggaagaatccggtcatcgtctacaacgag
caggccaaaaagagtataaggcttccggatcatctgcgcatcagtccttcacaagaggct
cttagggaattgtaccgaattcttggggagtcaaacgtgatattgcaataa
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