Rossellomorea sp. DA94: P8596_21035
Help
Entry
P8596_21035 CDS
T10138
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rod Rossellomorea sp. DA94
Pathway
rod03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rod00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P8596_21035 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rod03400
]
P8596_21035 (uvrB)
DNA repair and recombination proteins [BR:
rod03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P8596_21035 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8596_21035 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
P-loop_SecA
TrwB_AAD_bind
AAA_30
AAA_22
AAA_7
AAA
UB2H
AAA_16
AAA_19
HEM4
HerA_C
DUF87
CsgA
Motif
Other DBs
NCBI-ProteinID:
WGG45187
LinkDB
All DBs
Position
complement(4045106..4047088)
Genome browser
AA seq
660 aa
AA seq
DB search
MKDQFELKSKYKPEGDQPLAIEKLVQGINEGKRHQTLLGATGTGKTFTVSNVIKQVEKPT
LIIAHNKTLAGQLYSEFKEFFPDNAVEYFVSYYDYYQPEAYVPQTDTFIEKDASINDEID
KLRHSATSSLFERKDVIIIASVSCIYGLGNPEEYRELVLSLRTGMEIERNQLLRKLVDIQ
YERNDIDFQRGTFRVRGDVVEIFPASRDEHCMRVEFFGDEIDRIREVDALTGEIMGDRDH
IAIFPASHFVTREEKLQVAIKNIEKELEEQLAIMKEENKLLEAQRLEQRTRYDLEMMREM
GFCSGIENYSRHLTLRPAGSTPYTLLDYFPDDFLIVVDESHVTLPQIRGMFNGDQARKKV
LVDHGFRLPSAMDNRPLRFEEFEKKTQQLLYVSATPGPYELEHSPEMVEQIIRPTGLLDP
VIEVRPIEGQIDDLLGEINERIEKNERVLVTTLTKKMSEDLSAYLKEIGIKVQYLHSEIK
TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVTILDADKEGFLRSERSLIQTIGR
AARNSNGRVIMYADKITDSMQKALDETERRRTIQQEYNEKHGVTPTTIQKEIRDVIRATH
AAEEAGVYEGEQTKVSKMSKPERQKLIASLEVEMKEAAKALDFERAAQLRDTILELKAEG
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagatcaattcgagctcaaatccaaatataaaccagagggggaccagccccttgcc
atagagaagctggtacagggaatcaatgaagggaaacggcatcaaacgttacttggggcg
acagggacagggaagaccttcaccgtctccaatgtgatcaagcaggttgaaaagccgacc
ctcatcatcgcccataataaaacattggcgggacagctctacagtgagttcaaagagttt
ttccctgataatgccgttgaatattttgtgagttactatgattattatcagccggaagca
tatgttccgcaaacggataccttcattgaaaaggatgccagcatcaatgatgaaatcgat
aaattgagacactctgccacatcttccctgtttgaacggaaagatgtcatcatcattgcc
agcgtgtcctgcatttacggtttaggtaatccggaagagtatcgtgagctcgtcctatcc
ctcaggaccgggatggaaattgaacggaaccaattgcttcgcaagcttgtggatatccaa
tatgaacgaaatgacatcgattttcagcgtgggactttccgtgttcgcggagacgtggtt
gaaatattcccggcttcccgtgatgaacactgtatgcgtgtggaatttttcggggatgaa
atcgacaggatccgtgaagtggatgccctcaccggcgaaatcatgggtgaccgtgatcat
atcgcgattttcccggcttcccacttcgtaacccgtgaagagaaattacaggttgccatc
aagaatattgaaaaagagctggaagaacagctggcgatcatgaaggaagagaacaagcta
ctggaagctcagcggctggaacagcgaacccggtatgacctggaaatgatgagggaaatg
gggttctgttctgggatcgagaactattcccgccatctgacattgcgaccggcaggatcg
acaccctatacgcttctggactatttcccggatgacttcctgatcgtggtggatgagtcc
catgtgacgcttcctcagatccgggggatgttcaatggggaccaggcccgtaaaaaagtg
ctcgtggaccatggattccgtctgccttcagcaatggacaatcgtccccttcgctttgaa
gagttcgagaagaaaacccagcagctcctctatgtttcagcaactcctggaccatacgag
ttggagcatagtcctgaaatggtcgaacagatcatccggccgacgggacttcttgacccc
gtcatcgaggtacgtccgatcgaaggccaaatagacgatcttttgggtgagatcaatgaa
cggatcgagaaaaacgaacgtgtcctcgtgacgactttaacgaagaaaatgtcagaggat
ctctctgcctatctgaaggaaatcgggatcaaagtccaatacctccattctgaaatcaag
acgttggagcgtattgaaatcatccgggatcttcgtttagggaaatacgatgttttagtc
gggatcaacttactccgagaaggtctggatatacctgaagtatcgcttgttaccatattg
gatgctgacaaggaaggcttcctgcgttcggaacgttccctgatccagacaatcggccgt
gcagcccgtaacagtaacggaagagtcatcatgtacgcagataaaatcaccgattcgatg
caaaaggcactcgatgaaaccgagcgtcgccggacgatacagcaggagtacaatgaaaag
cacggcgtgaccccgacgacgatacaaaaagaaatcagggatgtcatcagggcgactcat
gccgctgaagaagcaggggtttatgaaggagaacagacaaaagtttcgaaaatgtctaaa
ccggagcgacaaaaacttattgctagcctggaagtggaaatgaaggaagcagccaaggca
ctggacttcgaacgtgcagcacagcttcgtgataccattcttgagctcaaggcggaagga
tga
DBGET
integrated database retrieval system
