Rossellomorea sp. DA94: P8596_22950
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Entry
P8596_22950 CDS
T10138
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
rod Rossellomorea sp. DA94
Pathway
rod03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rod00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8596_22950 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rod03021
]
P8596_22950 (rho)
03019 Messenger RNA biogenesis [BR:
rod03019
]
P8596_22950 (rho)
Transcription machinery [BR:
rod03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P8596_22950 (rho)
Messenger RNA biogenesis [BR:
rod03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P8596_22950 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
OB_RNB
ATPase_2
AAA
AAA_22
AAA_25
NACHT
Motif
Other DBs
NCBI-ProteinID:
WGG45528
LinkDB
All DBs
Position
complement(4451830..4453092)
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AA seq
420 aa
AA seq
DB search
MEELTISSLENMKLKELYELAKQYKVSYYSKLTKKELIFAILKVRAEQEGFFFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLHVEM
VNGEEPDSAKERVHFPGLTPLYPDRQMKLETTPNKISTRIMDLIAPVGFGQRGLVVAPPK
AGKTMLIKEIANSITTNHPEAELIILLIDERPEEVTDIERSVEAEVVSSTFDEVPENHIK
VAELVLERAMRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTVLATALVDTGSRMDDVIYEEFKGTGNLELHLDRSLAERRIFPAIDIR
RSGTRREELLIKPDHLEKLWAIRKAMSDQPDFAEKLMRKLKQSKTNEEFFNVLTEESKKR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttaacaatctctagcttagaaaatatgaagctgaaagagctttatgagcta
gccaaacaatacaaagtttcttattatagtaaattaacaaaaaaagaactgatttttgcc
atccttaaagttcgtgcagaacaagaaggcttcttcttcatggaaggtgtcctggagatc
atccaatcagaaggcttcggtttcttacgaccgatcaactattctccgagctccgaggat
atttatatttctgcatcgcaaatccgtcgcttcgaccttcgaaacggggataaagtatcg
gggaaagtacgtcctccgaaagaaaacgaacgttatttcggactgcttcatgttgaaatg
gtgaacggggaagagcctgattctgcgaaagagcgtgtacatttcccaggattgacgcct
ttataccctgaccgtcaaatgaagcttgaaacaacaccgaataaaatttctacgcgtatc
atggatctgattgcaccagtcggattcggacaacgtggattagtcgtggctccgcctaaa
gccggtaagacgatgctgatcaaagaaatcgccaattcgatcacaacgaatcatccggaa
gcagaactcatcattcttcttatcgatgagcgtccagaggaagtaacggacatcgaacgt
tcagttgaagcagaagtcgtcagttcgacatttgatgaggttccggaaaaccatatcaaa
gtggccgagctcgtacttgagcgcgccatgcgtttagtggagcacaagcgtgacgtcatc
atcctgatggatagtatcacacgtcttgcacgtgcgtacaatctcgtcatcccaccaagt
ggacggactttatccggtggtatcgaccctgctgcgttccaccgtccgaaacgattcttc
ggtgcggcacgtaacattgaagagggcggaagcttgacggtccttgcaacggcgcttgtt
gacacaggttcccgtatggatgacgtcatttatgaagagttcaaaggaacaggaaatctt
gaacttcacttggaccgttcccttgcagaacgccgtatcttcccggccatcgacatccgt
cgttccggaacgcgtcgtgaggaacttcttatcaaaccggatcatcttgaaaaactgtgg
gcgatccgaaaagccatgtccgatcagcctgatttcgccgagaagcttatgcgtaagctg
aagcaatcgaagacgaatgaagaatttttcaatgtgttgacagaagagtccaagaagcgt
taa
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