Rathayibacter oskolensis: Q0F99_02300
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Entry
Q0F99_02300 CDS
T09211
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
roe
Rathayibacter oskolensis
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
CarboxypepD_reg
PhyR_sigma-like
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
WKK71970
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Position
434457..436295
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AA seq
612 aa
AA seq
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MGRRAGSRGAVDPLGDAELIELVRRGEATATAELWRRHAAAARTVARAWSSSLDPDDLVS
EAFLRVLSTIERGGGPEGAFRPYLFTAVRNVAASWGRRQDRERPLAAEEDVVAPGPGPEE
TVLAALDRDLGVRAFRALPARWQEVLWYTEVEGLSPAEAAPLLGLRPNSVAALSHRAREG
LRGAWIQEHVTDVSAEGECRWVLERAGSHVRGRLPARDRLRVRSHLGECVGCRVALRDAE
QSGARLATVMLPLVAGVGGAAAYAAGGAVPGVSGGGGAAAGGSAASAGSVAGGASAATVA
VVAAGLVLVAGVAVAALLPNAGPETTRVPDASESAPESTPTEEETIAPVATVELTPSPAP
RPACDRAVGGAFPDVRPRRVGRACTGARTPVPRTAPSDPRADHDSPTAPAPPPDPTPGPT
PTATPGPTPAPPVNPTPTATPTPPVPVTSALETDPDERLLPGATGTAAPGAAVSVEDARS
GLVYASTVAGADGTWSLESLDLPVGDTAVTVRTTAPDGTETLSASETVRLRAPGVLAPST
ASASSGVPVLVLSDPGAVQLLVDGEVALERTVSSAGFVATLDLAAGEHEIDVRYASADGR
VGAVASTAVDVR
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
gtgggacgcagggcgggctctcgcggcgccgtcgacccgctcggcgacgccgagctgatc
gagctggtccgccgcggcgaggcgaccgcgacggccgagctgtggcggcggcacgcggcg
gcggcgcgcaccgtcgcgcgagcgtggtcgagctcgctcgatcccgacgatctcgtctcg
gaggccttcctccgggtgctctcgacgatcgagcggggcggcggcccggagggcgcgttc
cggccctacctcttcaccgcggtccgcaacgtcgccgcctcctgggggcgacgacaggat
cgggagcgcccgctcgccgcggaggaggacgtcgtcgcgccgggaccggggccggaggag
accgtgctcgccgcgctggatcgcgatctcggggtccgcgccttccgggccctgcccgcg
cggtggcaggaggtgctctggtacacggaggtggaggggctctccccggccgaggccgcg
cccctcctcggcctcaggcccaactcggtcgcggccctcagccaccgcgcccgcgagggc
ctccgcggggcctggatccaggagcacgtcaccgacgtctcggccgagggcgagtgccgg
tgggtcctcgagcgcgccggatcgcacgtccgcggtcgcctgccggcacgcgatcggctc
cgggtgcgctcgcacctcggggagtgcgtcggctgccgggtggcgctccgcgatgcggag
cagtccggcgcacgcctggcgacggtgatgctcccgctcgtcgccggcgtcggaggcgct
gccgcctacgccgccggaggcgcggttcccggggtgtcgggcggtggcggggcggcagcg
ggaggctctgcggcgagcgccgggtccgtggccggaggcgcctccgccgcgacggtcgcc
gtcgtcgcggccgggctggtgctcgtggcgggagtcgcggtggcggcgctgctgccgaac
gccggtcctgagacgacccgggtgccggacgcgtcggagagcgcaccggagtcgacgccc
accgaggaggagacgatcgcgcccgtggcgaccgtggagctcacgccgtcgccggcacct
cgacccgcctgcgaccgcgccgtcggcggagccttccccgacgtccggccccgacgcgtc
ggccgtgcctgcaccggtgctcgcacccccgtcccgcgaaccgctccaagcgacccccgt
gccgaccacgactccccgacggcaccggctccccctccggatcccactcccggtccgaca
cccacggccacccccggtccgactcccgcgcccccggtgaacccgacgccgaccgccacc
ccgaccccgccggtcccggtcacctcggctctcgagaccgacccggacgagcgcctgctc
ccgggcgccaccggcaccgcggcccccggtgcggcggtgtcggtggaggatgcgcggtcg
ggactcgtctacgcgagcacggtcgccggggcggacggcacctggtcgctcgagagcctc
gacctgccggtcggcgacacggcggtgaccgtgcgcaccaccgcgcccgacggcaccgag
acgctcagcgcctccgagaccgtgcggctgagggcgcccggcgtgctcgccccgtcgacg
gcgagcgcctcctccggagtccccgtgctcgtgctctcggacccgggcgcggtccagctc
ctcgtcgacggcgaggtcgccctcgagcggacggtctcgagcgcgggcttcgtggcgacg
ctcgatctcgcggccggagagcacgagatcgacgtgcgctacgcctccgcggacggccgt
gtcggggcggtcgcgtcgaccgccgtcgacgtgcgctga
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