Rickettsia oklahomensis: AAGW17_00920
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Entry
AAGW17_00920 CDS
T11123
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rof Rickettsia oklahomensis
Pathway
rof03030
DNA replication
rof03430
Mismatch repair
rof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AAGW17_00920 (dnaE)
03430 Mismatch repair
AAGW17_00920 (dnaE)
03440 Homologous recombination
AAGW17_00920 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rof03032
]
AAGW17_00920 (dnaE)
03400 DNA repair and recombination proteins [BR:
rof03400
]
AAGW17_00920 (dnaE)
Enzymes [BR:
rof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AAGW17_00920 (dnaE)
DNA replication proteins [BR:
rof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AAGW17_00920 (dnaE)
DNA repair and recombination proteins [BR:
rof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AAGW17_00920 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XBG66459
UniProt:
A0AAU7BZ56
LinkDB
All DBs
Position
complement(188364..191945)
Genome browser
AA seq
1193 aa
AA seq
DB search
MQPEFIHLRTQSSYSFLESALTIEKVVELALSNKMSAICLADRGNLFGSLEFALYAVKKG
LQPIHGVILNIQYDINIFAQILLIAKDEVGYKNLLKLSSLTFTKNDRKICDHINFEDLVK
YQEGLIALCCYTDGIVGKCLLARNEEQARLFACKLQGILGNRFYFEIMRHDLPEEQFIED
SYVRIAAELAIPLVATNKVLFSEKSMHDAHDVLLCISAGVTKEYTDRKTVSENCYFKSPS
EMIELFSDLPVAIENAVNLRERCCFAAHANPPMLPNFATKDISETDLIRKEAKAGLLVRL
ATKFKSENISLEDQEELNAEYFSRLNYELDIICNMNFAGYFLIVSDFIKWSKQEGILVGP
GRGSGAGSVVAWSLLITDLDPIKFGLLFERFLNPERISMPDFDIDFCQERREEVINYVRS
KYGNNRVGQIITFGKMQAKAVIKDVARVLSLPYKFADYLTELVPFSAVNPVTLEQAMREV
PELANAAKGNGLYNLEGEAELIKLVLDTSLILEGLHRHSSTHAAGIVIAGTNLVNIVPVY
KDVNSDMLIVGYSMKYSEIAGLIKFDFLGLQTLTVITNCKKLLKERGIEVNLNNITFDDN
KTYQMLCKGKGIGVFQFESVGMKDALRRLKPDSIRDLIALGALYRPGPMENIPTYIACKH
KLQQPDYLHELLKPILEETYGVVIYQEQVQRIAQVLAGYTLGAADLLRRAMGKKIKKEME
EQEEIFVKGAVANNIPESQARSIFATVAKFAGYGFNKAHAAAYGVISYQTAYLKANYPAE
FLVACLNLELNNHDKINLFLQEAKDSGIKIIAPNINISEGYFSVKSVIPRVATCHPRVVS
DPEKVHAMKIDYCFRGNDKESTEHDIKSCDSDKEETAIIFALGAIKGVTPNFGKLVTDER
KARGKFKSIIDFIERLPPKSINSKLLENLIKSGCFDELHDNRLQLFLSVPKLLSYSTSYH
EEQASNQFSLIKVSSLSPTILIDSDYADNNTLAFYEFDSMGVFISNHPLTQYQEIFSRLN
ILNTADLYNNLPYGTNRVNLAGVIQKKDSRMSVRGRFVTLVLSDPENIFELSIFSEEVLK
DYVHLLDVKSLVVVNCDVVKDEGGIKLTAKSFASIEDTINNKQFELQLYPQNYEDLRQIV
TILAARTNNNENNAKATIYLQSKEVKNFVAKITLLEKFLLQAQDFEVLKGYSK
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgaatttattcatttaagaacacaaagctcttattcttttctagaaagtgca
ttaacaatcgaaaaagtagtggagcttgctttatcaaataaaatgtctgctatttgtttg
gcagatagggggaatttatttggctcattagaatttgctttatatgcagtaaaaaaaggg
ctgcagccgatacacggtgttattctcaatatacaatatgatattaatatttttgctcaa
attttgcttatagctaaagatgaagtcggctataaaaatttactcaaactatcaagcctt
actttcactaaaaatgatcgtaagatctgtgatcacattaattttgaggatttagtaaaa
tatcaagaagggttaatagcattatgctgttataccgacggtattgttgggaaatgttta
ctggctcgtaatgaagagcaagcaaggctgtttgcatgtaaattacagggaattttaggt
aatcggttttattttgaaattatgaggcatgatttaccggaagaacagtttattgaggat
agttatgttagaattgctgctgagcttgctattccgcttgttgctactaataaagttttg
tttagtgagaaaagcatgcatgatgcacatgatgtattgttatgtatatcagccggtgtt
actaaggaatatactgaccgtaaaacagttagtgagaattgttattttaaatcaccaagt
gagatgatagaacttttttctgatttacctgttgctattgaaaatgcggtgaatttaaga
gaacgttgttgttttgcagcacatgcaaatccaccgatgctacctaattttgctaccaaa
gatattagtgaaacagatttaattagaaaagaagcaaaagcaggactacttgtaaggctt
gctacaaagtttaaatccgaaaatatttcgttagaggatcaagaagaattgaacgcagaa
tatttttctcgtcttaattacgagctggatattatctgtaatatgaattttgccggttat
tttttaattgtatcagattttattaaatggagtaaacaagaggggattttagttggaccg
ggtagagggtcgggagcaggttcggttgttgcttggagcttgcttattactgatctcgat
ccaattaaatttggtttattatttgaaagatttttaaatcctgaacgtatttcaatgcct
gatttcgatattgatttttgtcaagaaaggcgtgaggaagtaattaattatgtacgttct
aaatacggcaataatagagtagggcagattataacttttggtaagatgcaggcaaaggct
gtaattaaggatgttgcacgtgtgcttagcttaccttataaattcgctgattatctaaca
gaacttgtaccttttagtgcagttaatcctgttacacttgaacaggcaatgcgtgaagtt
ccggagcttgcaaatgctgctaaaggtaatggactgtataatttagagggtgaagcagag
ttaattaagctggtacttgatacttcgttaattcttgaggggctacataggcattcctcg
acccatgctgcaggaattgtaatagcaggcactaatttagtcaatatagtcccggtatat
aaagatgttaattctgatatgctgatagtcggttattctatgaaatattcagagattgcc
ggtttaattaaatttgattttctaggtttacaaaccctaacggttattaccaattgtaag
aaactgcttaaagagcgagggatagaagtaaatttgaacaatataacgtttgatgataat
aaaacctatcaaatgttatgtaaaggtaagggaatcggagtttttcaatttgaaagtgtc
gggatgaaagatgcactgagacgccttaagcctgattctatacgtgatttaatagcgctt
ggtgctttatatcgcccaggtcctatggaaaatatccctacctatatagcttgtaagcat
aaattacagcagcctgattatttacatgagctattaaagccaatcttagaagaaacttac
ggagtggtgatatatcaggaacaagtacaaagaatagcacaagttcttgccggttataca
ctaggtgctgctgatttacttcgtagagcaatgggtaagaaaattaaaaaagaaatggag
gagcaggaagaaatttttgttaaaggggcagttgctaataatattccggaatctcaagct
aggtccatctttgcgactgtggctaaatttgccggatacggttttaataaggcacacgcg
gcagcttatggcgttatttcatatcaaactgcatatcttaaagctaattatcctgcagaa
tttttggttgcctgcttaaatcttgaattaaataatcacgataaaattaatttattttta
caagaagcaaaagacagcggaataaaaattattgctcctaatattaatatttctgaaggg
tattttagtgtaaagtctgtcataccgcgagtcgcgacttgtcatccccgcgtggtcagt
gatccagagaaagttcatgcaatgaaaatagattattgctttcgtgggaatgataaagaa
agtactgagcatgacataaaaagttgtgattctgacaaagaagaaactgcaataatattt
gctttaggtgctattaaaggagtgacgccaaattttggtaagttagtaacagacgagcga
aaagcaagaggaaagtttaaatcaattattgattttattgaacgattaccaccaaaatct
attaacagtaaattactggaaaatttaattaaatccggctgttttgatgagttacatgat
aatcgattacaattatttttaagcgttccaaaattactttcttattcaacttcatatcat
gaagaacaggcatctaatcaatttagcttaattaaagtttctagtttaagtccaactatt
ttaatagatagtgattatgcagataacaatactttagctttttatgaatttgattctatg
ggtgtatttatttctaatcatcctcttacacagtatcaagaaatatttagccgtttaaat
attttaaatactgcggatttgtataataacttaccctatggtactaaccgagtaaatctt
gctggtgtaatacaaaaaaaggattctcgtatgtcagtaagaggtaggttcgtgacgctc
gtgctttccgatcctgagaatatctttgaactgagtatttttagtgaagaagttttaaaa
gattatgtacatttacttgatgttaaaagtttagtagtagttaattgtgacgtagttaaa
gatgaaggcggaataaaactaacggcaaaaagctttgcgtcaattgaggatacaattaat
aataaacaatttgaactacagctttatccacaaaattatgaagacttacggcaaatagta
acgatacttgcggctcgcactaataataatgaaaataatgctaaagctacaatatattta
caaagtaaagaggtaaagaattttgtagcaaaaattacattactggaaaaattcttgctc
caagcacaagattttgaggttttaaaaggatatagtaaatag
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