Rickettsia oklahomensis: AAGW17_04480
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Entry
AAGW17_04480 CDS
T11123
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
rof Rickettsia oklahomensis
Pathway
rof03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AAGW17_04480 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rof03019
]
AAGW17_04480 (pnp)
03016 Transfer RNA biogenesis [BR:
rof03016
]
AAGW17_04480 (pnp)
Enzymes [BR:
rof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AAGW17_04480 (pnp)
Messenger RNA biogenesis [BR:
rof03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AAGW17_04480 (pnp)
Transfer RNA biogenesis [BR:
rof03016
]
Prokaryotic type
tRNA degradation factors
AAGW17_04480 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
KH_2
KH_DUF2096_C
Motif
Other DBs
NCBI-ProteinID:
XBG66200
UniProt:
A0AAU7BY25
LinkDB
All DBs
Position
994787..996976
Genome browser
AA seq
729 aa
AA seq
DB search
MFNEITKSITWNGKILELSTGKIARQADGSVTVKMGDSVLLCTVVVANKAKEGIGFFPLT
INYREMSYAAGKIPGGFFKREGKASDREVLVSRLIDRPIRPLFHPAFVNETHITCTVLSY
DPETPVDILAIIGASAALALSPAPYLEIVAASKVGLINGEFVLNPTLELLKTSQLDLVVA
GTADSVMMVESEAHLLSEAQMLEAIKFGFESFQPVVKIIKALEQEAKRPKFEMQDLYPAA
LKKEIEQLFAKEIEQAFAIKSKRERNSSLDLIPEKVLTHFISDIENKKYNNYQIESALKS
VESDILRKEILEKNKRIDGRSTTDIRQIACEVGLLPSAHGSALFTRGETQSLVSITLGTS
LDEQIVDSLEGEYKERFMLNYIFPPYSVNEAIPMKAPSRREVGHGKLAWRAIHPILPNKV
QFPYSIRVVAETTESNGSSSMATVCGSSLALMHTGVPIKAPVAGIAMGLVKEGKKLAVLS
DILGDEDYFGDMDFKVAGTSEGITALQMDIKISGVDFKIMKVALEQARLGRLHILEQMNK
VISKPNSELSKNAPSTTNIKIDKDKIRDIIGPGGKVIKEICETSGAKIDIRDDGTVSVYA
SDRDKLKIALDKIKAIVVEPEIGEIFNGTVMKILDSGAFINYLGNKDGFVHISEISEERI
ETVSSVVKQGDIVKVKLIGFDNKGKAKLTIKNAKENSEPEQHDSIKKRAWHEDNNAGTVE
VITERKYFN
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacgaaataactaagagtattacatggaatggaaaaattctggagcttagtaca
ggtaaaatagcacggcaggctgatggcagcgttacggtaaaaatgggtgattccgtttta
ttatgtacggtagtagtagctaacaaagcaaaagagggtatcgggttttttcctttaaca
attaattatagagaaatgtcatatgctgctggtaaaatacctggtggtttttttaagcgt
gagggaaaagcatcagatagagaagttttagtatctcgtttaatagatagaccgattaga
ccattatttcatccagcttttgttaatgaaacacatataacttgtacagtactttcatat
gaccctgaaactccggtagatatacttgccattatcggtgcatcagctgcacttgcgcta
tctcctgccccttatctagaaatagttgctgcaagtaaagttggtttaatcaacggtgaa
tttgttttaaatccaacacttgaattattaaaaacaagtcagcttgatttagtagttgca
ggaacagcagattcagtaatgatggtggaatcggaagctcatttactctctgaagcacaa
atgctagaagctataaagtttggatttgaaagcttccagccggtagtaaagataattaaa
gcactagaacaagaagctaaaagaccgaagtttgaaatgcaagatttataccctgctgca
ttaaagaaagaaattgagcagttatttgcaaaagaaattgaacaagcttttgctataaaa
tctaaacgggaacgtaacagtagtttagacttaattcctgaaaaggttcttacacatttt
ataagcgacatagaaaataaaaaatataataattatcaaatagaatcagctttaaaatct
gttgaatcagatatattacgcaaagaaattttagaaaagaataaacgtatcgatggaaga
agtaccacggatataagacaaattgcttgtgaagtaggtttattaccttctgcacacggt
tcagctttatttactagaggcgaaacgcaaagcttagtcagtatcacacttggaactagt
ttagatgaacaaatagttgatagtttagaaggtgaatataaagagcgttttatgcttaat
tatatctttccgccttactccgtaaatgaggcaattcctatgaaagcacctagccgtcgt
gaagtcggacatggtaaacttgcatggcgtgctattcatccaatattacctaataaagta
caattcccctactctataagagttgtagctgaaactacggaatctaatggttcttcttca
atggcaaccgtatgtggtagttctcttgctttaatgcacaccggtgttccaataaaagca
ccggttgcaggcattgctatggggcttgttaaagaaggcaagaaacttgccgtattatcg
gatattcttggagatgaggattatttcggtgatatggatttcaaggttgcaggcactagt
gaaggaattactgcattacagatggatattaaaatatccggagtagattttaaaataatg
aaagtagctttagagcaagcacgacttggtcgtttgcatatacttgagcaaatgaataaa
gttattagtaaaccaaatagcgaactaagtaaaaatgctccttctactactaatataaaa
atagataaagataaaattagagatattatagggccaggtggtaaagtaataaaggaaatt
tgtgaaactagtggtgctaaaatagatataagagatgacggtacagtttccgtttatgct
tcagatagagataagctaaaaattgccttagataaaattaaagctattgtcgtcgaacct
gagattggtgaaatatttaacggtacggtaatgaaaatattagattccggtgcttttatt
aattatttaggtaataaagacggatttgttcatattagtgaaatttcagaagaaagaata
gaaacggttagcagtgttgttaaacaaggcgatatagtaaaagttaagctaataggtttt
gataataaaggtaaagcaaaactaactattaaaaatgctaaggaaaattcagaacctgag
caacatgattctattaaaaaacgcgcttggcatgaagataataatgcaggaacagttgaa
gtaattacagaacgtaagtattttaattaa
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