Roseateles sp. L2-2: ACQZ13_11730
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Entry
ACQZ13_11730 CDS
T11386
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
rog Roseateles sp. L2-2
Pathway
rog03030
DNA replication
rog03430
Mismatch repair
rog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACQZ13_11730 (dnaE)
03430 Mismatch repair
ACQZ13_11730 (dnaE)
03440 Homologous recombination
ACQZ13_11730 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rog03032
]
ACQZ13_11730 (dnaE)
03400 DNA repair and recombination proteins [BR:
rog03400
]
ACQZ13_11730 (dnaE)
Enzymes [BR:
rog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACQZ13_11730 (dnaE)
DNA replication proteins [BR:
rog03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACQZ13_11730 (dnaE)
DNA repair and recombination proteins [BR:
rog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACQZ13_11730 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
AAA_8
Motif
Other DBs
NCBI-ProteinID:
XUK42036
LinkDB
All DBs
Position
2621552..2625115
Genome browser
AA seq
1187 aa
AA seq
DB search
MAFVHLRSHTEFSVVDGTLRIDDAAAAAAKDGQVALGLTDLANMFGGVKFYNACRKKGVK
PILGVEAWLEPEAVDRPPSRVLLLVQDIQGYLNLSELLSRAWIQNVQRNQALLKLEWMQE
LNAGLICLGGMQFGPVGQALIAGDEARALDVAQRLAAIYPNRFYIELQRAGLPGQEALLR
QLVPLAAKAKLPVVATHPIQFLEEDDFEAHEARVCVADGETLANPKRVKRFLPSQHFKSQ
AEMEALFADIPSAIANTVEIAKRCSLTLVLGKPQLPNFPTPIQADGTPMPMEHYFRMLSF
EGLEDRLQLLFPDEAKRDAARPRYVERLEFELATIIKMGFPGYFLIVGDFIRWAKNNGCP
VGPGRGSGAGSLVAYVLLITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQGNRDRVIEY
VKDKYGRPAVSQIATFGTMAAKGALRDIGRVLGMGFGHVDSIAKLVPAPPGKTVTLAKLP
PGFDPDKAKMVYARHESPEIEEREAQDEEVAGLLEMAARVEGTVRSIGMHAGGVLIAPGK
ITDFCPQYQQPGSTSAVSQYDKDDVEAIGLVKFDFLGLATLTILELAKDFIVGRYPEAAD
FAFETIPLDDKRTYKLFSDGLTESVFQFESSGMQRMLKDAKPSRLEDLIALNALYRPGPM
DLIPSFVARKHGKETVVYPHPLVEPVLSETYGIMVYQEQVMQTAQVLGGYSLGGADMLRR
AMGKKKAEEMAMHRDLFRKGAAEKGIDQDKADEVFDLMEKFAGYGFNKSHAAAYSLLAYH
TGWLKVHYTAEFFAANMTIESDDTDKLKVLMNDAKLFGIEFEPPNINLGVGRFEPMSADE
GTSKSVAKEGKAGTTPRARKINYSLGAIKGTGAGAIEAIVRARTEGGPFTSFFDFCARVD
RKAVNKRVVEALIKAGAFDALHANRARLLASVALGYTYADNLAQNVNQGGLFDFDGGHGS
STAEPDFVEVPEWGIKERLSLEKTAIGFYLSGHLFDQAETELRRMVKRRIVDLQDSREPT
TVAGIVSDMRVINGSRGRVAIFKIDDKTHAIEAVANEEMLNANKELLAEDELIIAVGKVQ
NDRFSGGLRMNVQQVFGLAAARARFGRYLRTAPNLSAATVLELVKSWPAKRVETEQGVLS
QGLELRIPIKRNGAIAELGLGGAGKFWPSDEALEQLKPAEIVYDSGG
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atggctttcgttcatctccgctcccacaccgagttctccgtcgtcgacggcaccctgcgc
atcgacgacgccgccgcggcggccgccaaggacggccaggtcgccctgggcctgaccgac
ctcgcgaacatgttcggcggggtgaagttctacaacgcctgccgcaagaagggcgtgaag
ccgatcctgggcgtggaggcctggctggagccggaggcggtggaccgtccgccgtcgcgg
gtgctgctgctggtgcaggacatccagggttatctgaacctgagcgagctgctgtcgcgc
gcctggatccagaacgtgcagcgcaaccaggcgctgctgaagctggagtggatgcaggag
ctcaacgccggcctgatctgcctgggcgggatgcagttcggcccggtcggccaggcgctg
atcgccggcgacgaggcgcgcgcgctggatgtggcgcaacgcctcgccgcgatttatccg
aaccgcttctacatcgagctgcaacgcgccggcctgccgggccaggaagcgctgctgcgc
cagctggtgccgctggccgccaaggcgaagttgccggtggtggcgacgcatccgatccag
ttcctggaggaagacgacttcgaggcccacgaggcgcgcgtgtgcgtggccgacggcgag
acgctggccaatccgaagcgggtgaagcgtttcctgcccagccagcatttcaagagccag
gcggagatggaggcgctgttcgccgacatccccagcgcgatcgccaacacggtggagatc
gcgaagcgctgcagcctgaccctggtgctgggcaagccgcagctgccgaacttcccgacc
ccgatccaggccgacggcacgccgatgccgatggagcactacttccgcatgctctcgttc
gagggcctggaagaccggctgcagctgctgttcccggacgaggccaagcgcgacgcggcg
cggccgcgctacgtggagcggctggagttcgagctggcgaccatcatcaagatgggcttc
cccggctacttcctcatcgtgggtgacttcatccgctgggcgaagaacaatggctgcccg
gtgggcccgggacggggctcgggcgcgggctcgctggtcgcctacgtgctgctgatcacc
gacctggacccgctgcagtacaacctgctgttcgagcgcttcctgaacccggaacgggtc
tcgatgcccgacttcgacatcgacttctgccagggcaaccgcgaccgcgtcatcgagtac
gtgaaggacaagtacggccgcccggcggtgagccagatcgcgaccttcggcaccatggcg
gccaagggcgcgctgcgcgacatcggacgcgtgctgggcatgggcttcggccacgtggac
tcgatcgcgaagctggtgccggcgcctccgggcaagacggtgacgctggccaagctgccg
ccgggcttcgatccggacaaggccaagatggtctacgcgcgccacgagtcgccggagatc
gaggaacgcgaggcgcaggacgaggaagtcgccggcctgctggagatggcggcgcgcgtg
gagggcacggtgcgctccatcggcatgcacgccggcggcgtgctgatcgcgccgggcaag
atcaccgacttctgcccgcagtaccagcagccgggctcgacctcggcggtcagccagtac
gacaaggacgacgtcgaggccatcggcctggtcaagttcgacttcctgggtctggccacg
ttgaccatcctggagctggccaaggacttcatcgtcggccggtatcccgaggcggccgac
ttcgcgttcgagaccatcccgctggacgacaagcggacctacaagctgttctccgacggc
ctgacggagtcggtgtttcagttcgaatcgagcggcatgcagcgcatgctgaaggacgcc
aagccgtcgcgcctggaggacctgatcgcgctgaacgcgctgtaccgcccggggccgatg
gacctgatccccagcttcgtcgcgcgcaagcacggcaaggagacggtggtgtacccgcac
ccgctggtggagccggtgctgtccgagacctacgggatcatggtctaccaggagcaggtg
atgcagaccgcccaggtgctgggcggctactcgctgggcggcgcggacatgctgcgccgc
gcgatgggcaagaagaaggccgaagagatggccatgcaccgcgacctgttccgcaagggc
gcggcggagaagggcatcgaccaggacaaggccgacgaggtcttcgacctgatggagaag
ttcgcgggctacggcttcaacaagtcgcacgcggctgcgtactcgctcctggcgtatcac
accggttggctgaaggtgcattacacggcggagttcttcgccgcgaacatgaccatcgaa
tcggacgacaccgacaagctcaaggtgctgatgaacgacgcgaagttgttcggcatcgag
ttcgagccgcccaacatcaacctcggcgtcggccgtttcgagccgatgagcgcggacgaa
ggcacgtcgaagtcggtggccaaggaaggcaaggccggcaccacgccgcgtgcgcgcaag
atcaactacagcctgggggcgatcaagggcacgggcgccggcgcgatcgaggcgatcgtg
cgcgcgcgcaccgagggcggcccgttcacgagcttcttcgacttctgcgcccgcgtggac
cgcaaggcggtcaacaagcgcgtggtggaggcgctgatcaaggccggcgccttcgacgcg
ctgcatgcgaaccgagcacggctgctggccagcgtcgcgctgggctacacctacgccgac
aacctggcgcagaacgtcaaccagggcgggctgttcgacttcgacggcgggcacggctcg
tcgacggcggagccggacttcgtcgaggtgcccgagtgggggatcaaggagcggctgagc
ctggagaagacggcgatcggcttctacctgtcgggacacctgttcgaccaggcggagacg
gagctgcgccgcatggtcaagcgccgcatcgtggacctgcaggacagccgcgagcccacg
acggtggcgggcatcgtgtcggacatgcgggtgatcaacggctcgcgcgggcgggtggcg
atcttcaagatcgacgacaagacgcatgcgatcgaggcggtggccaacgaggagatgctc
aacgccaacaaggagctgctggcggaggacgagctgatcatcgcggtgggcaaggtgcag
aacgaccgtttctcgggcgggctgcggatgaacgtgcagcaggtgttcgggctggcggcg
gcgcgggcgcgcttcgggcgctacctgcgcacggcgcccaacctgtcggcggccacggtg
ctggagctggtcaagagctggccggccaagcgcgtggagacggagcagggcgtgctcagc
caggggctggagctgcgcatcccgatcaagcgcaacggcgcgatcgcggaactgggactt
ggcggcgcgggcaagttctggcccagcgacgaggcgctggagcagctcaagccggcggag
atcgtgtacgactcgggcgggtga
DBGET
integrated database retrieval system
