Roseateles sp. L2-2: ACQZ13_17970
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Entry
ACQZ13_17970 CDS
T11386
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
rog Roseateles sp. L2-2
Pathway
rog03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACQZ13_17970 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rog03400
]
ACQZ13_17970 (uvrB)
DNA repair and recombination proteins [BR:
rog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACQZ13_17970 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACQZ13_17970 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
UB2H
Motif
Other DBs
NCBI-ProteinID:
XUK37739
LinkDB
All DBs
Position
complement(4010560..4012725)
Genome browser
AA seq
721 aa
AA seq
DB search
MSRSTVAKPETSVAKGEKPAPPEAEAAGAGEPPKGEFVSFEGSPFQLFQPYPPAGDQPTA
IQGLVDGVNDGESFQTLLGVTGSGKTFTMANTIARLGRPAIVFAPNKTLAAQLYSEFREF
FPKNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSAINEQIEQLRLSCTKSLLERRDVVIVA
SVSAIYGIGNPSDYHQMVMTLRVGDKVGQRDVIQQLARMQYTRNEMEFTRGHFRVRGDTI
DVFPAEHSELALRIELFDDEVEGLVLFDPLTGQIRQKIPRFTVYPSSHYVTPRDRVVAAI
ETIKEELRERVAFFIKEGKLVEAQRLEQRTRFDLEMLQEVGHCKGIENYTRHLSQAAPGD
PPPTLVDYLPPDALMFLDESHVLIGQFGGMYNGDRARKSTLVEYGFRLPSAMDNRPLKFE
EYERKMRQAIFVSATPGDYEKRQAGNVVEQLVRPTGLVDPVVEVRPAVHQVDDVLQEIRD
RVEIHERVLITTLTKRMAEQLTEYLSDNGVKVRYLHSDIDTVERVEILRDLRLGTFDVLV
GINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAARNVNGKAILYADRMTESM
KKAIGETERRRAKQVEFNEANGITPRGVVKRIRDLIDGVYSDKPGRDDAKVIHDAAEVEA
LSEKDLSKRITQLEKQMLEHARNLEFEKAARLRDQLSQLKEQAFGAAVHDNVVPITAGKG
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttctaccgtcgccaagcctgaaacctccgttgccaagggggagaaacctgcc
ccgccagaggcggaagccgccggcgcgggcgagccgccgaagggcgaattcgtctctttc
gaaggctctcccttccagctcttccagccgtatccgccggcgggcgaccagccgacggcc
atccaggggctggtggacggcgtcaacgacggcgagagtttccagacgctgctgggcgtg
acggggtcgggcaagaccttcacgatggccaacacgatcgcgcgcctcggacgcccggcg
atcgtcttcgcgcccaacaagacgctggcggcgcagctgtacagcgagttccgcgagttc
ttccccaagaacgcggtcgagtacttcgtcagctactacgactactatcagcccgaggct
tacgttccgcagcgcgacctgttcatcgagaaggacagcgcgatcaacgagcagatcgag
cagttgagactgtcctgcacgaagagcctgctggagcggcgcgacgtggtgatcgtggcg
tcggtgtcggcgatctacggcatcggcaacccgagcgactatcaccagatggtgatgacg
ctgcgggtgggcgacaaggtcggccagcgcgacgtgatccagcagctggcgcgcatgcag
tacacgcgcaacgagatggaattcacccgcggccacttccgcgtgcgcggcgacacgatc
gacgtgttcccggccgagcactcggagctggcgctgcggatcgagctcttcgacgacgag
gtcgaagggctggtgctcttcgatccgctgaccggccagatccggcagaagatcccgcgc
ttcaccgtctatccgtcgagccactacgtgaccccgcgcgatcgcgtggtcgccgcgatc
gagacgatcaaggaggagctgcgcgagcgcgtcgccttcttcatcaaggagggcaagctg
gtcgaggcccagcggctggagcagcgcacgcgcttcgacctggagatgctccaggaggtc
ggccactgcaagggcatcgagaactacacgcgccacctgtcgcaggccgcgcccggcgat
ccgccgccgacgctggtggactacctgccgcccgacgcgctgatgttcctggacgagagc
cacgtgctgatcggccagttcggcggcatgtacaacggcgaccgggcgcgcaagagcacg
ctggtggagtacggcttcagactgccgtcggcgatggacaaccggccgctgaagttcgag
gagtacgagcgcaagatgcgccaggccatcttcgtcagcgcgacgccgggcgactatgaa
aagcgccaggccggcaacgtggtcgagcagctggtgagaccgacgggactggtggacccg
gtcgtcgaggtgagaccggccgtgcaccaggtcgacgacgtgctgcaggagatccgcgac
cgcgtcgagatccacgagcgcgtgctgatcacgacgctgaccaagcgcatggccgaacag
ctgaccgagtacctcagcgacaacggcgtgaaggtgcgctacctgcactcggacatcgac
accgtcgagcgggtggagatcctgcgcgacctgcggctcgggaccttcgacgtgctggtg
ggcatcaacctcctgcgtgagggcctggacatccccgaggtgtcgctggtggcgatcctg
gacgcggacaaggaaggtttcctgcgcgcggaacgcagcctgatccagaccatcgggcgg
gccgcgcggaacgtgaacggcaaggcgatcctgtatgcggaccgcatgaccgagtcgatg
aagaaagccatcggcgagaccgaacgccgtcgcgccaagcaggtcgagttcaacgaggcc
aacggcatcacgccgcgcggcgtggtcaagcgcatccgcgacctgatcgacggggtctac
agcgacaagccggggcgcgacgacgccaaggtgatccacgacgcggcggaggtcgaggcg
ctgagcgagaaagacctcagcaagcgcatcacccagctggagaagcagatgctggaacac
gcgcgcaacctggagttcgagaaggccgcgcggttgcgcgaccagctctctcagctcaag
gaacaggcgttcggcgcggccgtccacgacaacgtcgtgccgatcaccgcgggcaagggg
aagtaa
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