KEGG   Roseateles sp. L2-2: ACQZ13_19285
Entry
ACQZ13_19285      CDS       T11386                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
rog  Roseateles sp. L2-2
Brite
KEGG Orthology (KO) [BR:rog00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rog03400]
    ACQZ13_19285
Enzymes [BR:rog01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     ACQZ13_19285
    5.6.2.6  RNA 3'-5' helicase
     ACQZ13_19285
DNA repair and recombination proteins [BR:rog03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    ACQZ13_19285
SSDB
Motif
Pfam: WHD_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: XUK42699
LinkDB
Position
complement(4310586..4313300)
AA seq 904 aa
MAAVDAWLDEKGWTPFPFQRRVWEAIARGRNGLLHSSTGSGKTLAVWLGALAALRDGVGA
EARVHGGKAVAPPLTVLWITPMRALAADTLRALEAPMAALCPGWTAALRSGDTTSAQRAA
QDRRLPTVLVTTPESLSLLLSRADARDQLGQVRLVVVDEWHELMGNKRGAQTQLALARLR
RFASAYSLSRLRERAGVRASGRGSTLMTWGLSATLGNLDEALRTLQGTATTDADAVIVQG
ETDKTLVIDTLLPETAERFAWAGHMGLRMLPQVVEAIESSESCLVFTNMRSQAERWYRAL
LEARPDWAGVLALHHGSLDREVREWVELGLKEGRVKAAVCTSSLDLGVDFLPVDRVLQIG
SAKGVARLVQRAGRSGHAPGRPSRITLVPTHSLELVEAAAAREAVRAGRIEARHSPRAPL
DVLVQHLVTVALGGGFRPDELLAEVRSTVAYEELSMENWQWCLDFVRQGGPSLTAYPDYH
RVVPDEDGVWRVPDARLARRHRVNIGTIVSDASISVQYLSGGKLGSVEEGFIARLKPGDA
FMFSGRLLELVRVEQMTALVRRATAGRAALPRWNGGRMPLSSTLADAVLRELADADAGRF
DSPEMQCVRPLIDIQRRWSGVPGPDVLVAETLKSREGWHLFLYPFAGRQVHLGLAGLIAW
RAAQPETGTFSIALNDYGIELLSAKAIDWAERLPALLTLPPMEDLLREVLASLNATELAR
RRFREIARIAGLIFQSHPGERRSNRQLQASATLFFEVFQQHDPDNRLLAQAQQELLTQEL
DVRHLASALDRMGRQTLQVHALKKPTPLAFPLMVERFREKLSNESLGDRIARMVSELERS
AGGDAVGTAREPAERALAVFAKKDSPQFAIQADEAVASVRDSLALETRGEAPARRREAGG
RRRR
NT seq 2715 nt   +upstreamnt  +downstreamnt
atcgctgcggtcgacgcgtggctcgatgagaagggatggaccccgtttccgttccagcgg
cgcgtctgggaagcgatcgcgcgcggccgcaacggactgctgcattcgagcaccggcagc
ggcaagacgctggcggtgtggctgggggcgctcgcggcgctccgggatggggtcggcgcc
gaggcgcgcgttcatggcggcaaggccgtcgcgccgccgctgacggtgctctggatcacg
ccgatgcgcgcgttggctgccgacacgctgcgcgcgctggaggcgccgatggcggcgctg
tgtcccgggtggaccgccgcgctgcgcagcggagacacgacctcggcgcagcgcgccgcg
caggaccggcgtctgccgacggtgctcgtgacgaccccggagagcctgtcgctgctgctg
tcgcgggcggatgcgcgcgatcagctcgggcaggtgcggctggtcgtcgtcgacgaatgg
catgagttgatggggaacaagcgcggcgcgcagacgcagttggcgctggcgcggctgcgg
cggttcgcttccgcttactccctctcccgcttgcgggagagggcaggggtgagggccagc
ggccgcggcagtacgctgatgacctggggcttgtcggccacgctgggcaatctcgacgag
gccctgcggaccttgcaaggcaccgcgaccaccgacgccgacgcggtgatcgttcaaggc
gagaccgacaagaccctggtcatcgacacgctgctgcccgagaccgccgagcgtttcgcc
tgggcgggccacatgggcctgcgcatgctgccgcaggtggtcgaggcgatcgagtccagc
gagagctgcctggtcttcaccaacatgcgctcgcaggccgagcgctggtatcgcgcgctg
ctggaggcgcgtcccgactgggccggcgtgctggcgctgcaccacggctcgctggaccgc
gaggtgcgcgagtgggtcgagctcggcctgaaggaaggccgcgtgaaagccgcggtctgc
acgtccagcctggacctgggcgtggacttcctgccggtggaccgcgtgctgcagatcggc
tcggccaagggcgttgcgcggctggtgcagcgcgcgggccgctccggccacgcgccggga
cgcccgtcgcggatcacgctggtgcccacgcacagcctggagctggtcgaagccgccgcc
gcgcgcgaggccgtccgcgccggccgcatcgaggcccggcacagcccgcgcgcgccgctg
gacgtgctggtccagcacctggtcaccgtggcgctgggcggcggcttccggccggacgag
ctgctcgccgaggtgcgcagcaccgtcgcctatgaagagctgagtatggagaactggcag
tggtgcctggacttcgtccgccagggtggcccgtcgctgacggcgtatccggactaccac
cgcgtcgtgcccgacgaggacggcgtctggcgcgtgcccgacgcgcgtctggcccgccgc
caccgcgtcaacatcggcaccatcgtcagcgacgcgtcgatcagcgtgcagtacctgagc
ggcggaaaactcggcagcgtcgaagaaggcttcatcgcgcgcctgaaacccggcgacgcg
ttcatgttcagcggccggctgctggagctggtgcgcgtcgagcagatgacggcgctggtg
cggcgcgcgacggccggacgcgccgccttgccgcgctggaacggcggccgcatgccgctg
tcgagcacgctcgccgacgccgtgttgcgcgagctggccgacgccgacgcgggccgcttc
gactcccccgaaatgcaatgcgtgcggccgctgatcgacatccagcggcgctggtccggc
gtgccgggccccgacgtgctggtggcggagacgctgaaatcgcgcgaaggctggcatctc
ttcctctatcccttcgccggacggcaggtgcatctgggcctggccgggctgatcgcgtgg
cgcgcggcgcagccggagaccggcaccttctcgatcgcgctgaacgactacggcatcgag
ctgctcagcgccaaggcgatcgactgggcggagcgtctgcccgcgttgctgacgctgccg
ccgatggaggacctgctgcgcgaggtgctcgccagcctgaacgcgacggagctcgcacgg
cggcgcttccgcgagatcgcgcgcatcgccggcctgatcttccagagccaccccggcgag
cgtcgcagcaaccggcagctgcaggcctcggcgaccttgttcttcgaggtgttccagcag
catgatccggacaaccggctgctggcgcaggcgcagcaggagctgctcacgcaggaactc
gacgtgcgccacctcgcctcggcgctggaccgcatgggccggcagaccctgcaggtccac
gcgctgaagaagccgacgccgctggcgtttccgttgatggtggagcgcttccgcgagaag
ctcagcaacgagtcgctcggcgaccgcatcgcgcggatggtgtcggaactggagcgcagc
gccggcggcgacgcggtcggcaccgcgcgcgagccggcggagcgggcgttggcggtgttc
gcgaagaaggactcgccgcagttcgcgattcaagcggacgaggccgtggcgtcggtgcgg
gattcgctcgcgctggagacgcgcggcgaggcgcccgccaggcggcgcgaggccggtggg
cggagaaggcgatga

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