Roseateles sp. L2-2: ACQZ13_22950
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Entry
ACQZ13_22950 CDS
T11386
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rog Roseateles sp. L2-2
Pathway
rog03420
Nucleotide excision repair
rog03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACQZ13_22950
03430 Mismatch repair
ACQZ13_22950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rog03400
]
ACQZ13_22950
Enzymes [BR:
rog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACQZ13_22950
DNA repair and recombination proteins [BR:
rog03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACQZ13_22950
MMR (mismatch excision repair)
Other MMR factors
ACQZ13_22950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
ResIII
DUF6663
Motif
Other DBs
NCBI-ProteinID:
XUK38655
LinkDB
All DBs
Position
complement(5142081..5144513)
Genome browser
AA seq
810 aa
AA seq
DB search
MNSQDFGDERPTPPQEDLFTPRAPRGLLDNLNPEQYAAVTLGQEPALILAGAGSGKTRVL
TTRIAWLMSQGHATPASVLAVTFTNKAAKEMVTRLSAMLPVNVRGMWIGTFHGLCNRFLR
AHWKLAGLPQGFQILDSGDTVSAVKRVIKAMKLDEERFVPKQVSWYIAGAKEDGMRPKDI
DLRDEQTRKLVEIYQAYQDQCEREGVVDFAELMLRSFELMRDNQAVREHYQRRFQYVLVD
EFQDTNKLQYAWLKMFAPPGRGQGVFAVGDDDQSIYAFRGARVGNMADFEREYRVRQVVK
LEQNYRSFGNILDAANALISNNSHRLGKNLRTEAGPGEPVRVHEASSDFAEAQWLLEEAQ
ALHRQGLARKEIAVLYRSNAQSRVIESALFNAGIPYRVYGGLRFFERAEVKHALAYLRLI
ENPNDDTSFLRVVNFPARGIGARTIEQLQDAARPSGRSLVQSIGAVGGRGGASLAGFVGL
IDAMREATAGLTLREIIEHIIEHSGLTTFYRAEKEGEDRLENLSELVNAAEAFVTQEGFG
KDAVALPVDEHSPGAIAEGLPTAVAPAAPATPDAETGEIMSPLAAFLTHASLEAGDNQAQ
AGQDAIQLMTVHSAKGLEFDAVFITGLEEGLFPHENSMSDSDGLEEERRLMYVAITRARQ
RLYISFCQTRMLHGQTRYNIKSRFMEELPEETLKWLTPRNQGFGSGFAKDYQQAWQRGSG
LKSMVGAGRVDPSAFPQAPVPQAMKQSAAEKTGAEHGGLRVGKGVFHNKFGEGVLLTLEG
SGPDARAQVNFGRHGTKWLALSVAKLTPID
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaattcccaggattttggcgacgagcgcccgaccccgccgcaagaggacctgttcacg
ccgcgcgcgccgcgcggcctgctggacaacctcaaccccgagcagtacgccgcggtgacg
ctggggcaggagcccgcgctgatcctggccggcgccggctcgggcaagacccgcgtgctg
acgacgcgcatcgcctggctgatgagccagggccacgcgacgcccgcgtcggtgctggcg
gtgaccttcaccaacaaggccgccaaggagatggtcacccgcctgtccgcgatgctgccg
gtgaacgtgcgcggcatgtggatcggcaccttccacggcctgtgcaaccgcttcctgcgc
gcgcactggaaactggccggcttgccgcaaggtttccagatcctggactcgggcgacacc
gtctccgccgtcaagcgcgtcatcaaggcgatgaagctcgacgaggagcgcttcgttccc
aagcaggtctcctggtacatcgccggcgcgaaagaggacggcatgcgtcccaaggacatc
gacctgcgcgacgagcagacccgcaagctggtcgagatctaccaggcctaccaggaccag
tgcgagcgtgaaggcgtggtcgacttcgccgagctgatgctgcgctcgttcgagctgatg
cgcgacaaccaggccgtgcgcgagcattaccagcgccgcttccagtacgtgctggtggac
gagttccaggacaccaacaagctgcagtacgcctggctgaagatgttcgcgccgccgggg
cgcgggcagggcgtgttcgcggtcggcgacgacgaccagagcatctacgccttccgcggc
gcgcgcgtgggcaacatggccgacttcgagcgcgagtaccgcgtgcgccaggtcgtgaag
ctggaacagaactaccgcagcttcggcaacatcctggacgcggccaacgcgctgatcagc
aacaacagccaccgcctgggcaagaacctgcgcaccgaggccggtcccggcgagccggtg
cgggtgcacgaggccagcagcgacttcgccgaggcgcaatggctgctggaggaagcgcag
gcgctgcaccgtcagggcctggcccgcaaggagatcgcggtgctctaccggagcaatgcg
caatcgcgggtgatcgagtcggcgctgttcaacgccggcattccgtaccgcgtgtacggc
ggcctgcgcttcttcgagcgcgccgaggtgaagcacgcgctggcctacctccgcctgatc
gagaaccccaacgacgacaccagcttcctgcgcgtcgtcaacttcccggcgcgcggcatc
ggcgcgcgcaccatcgagcaactgcaggacgcggcgcggccgagcgggcgttcgctggtc
cagagcatcggcgcggtcggcggccgcggcggtgcgagcctggcgggcttcgtcggtctg
atcgacgcgatgcgcgaggccacggccggactcacgctgcgcgagatcatcgaacacatc
atcgagcactccggcctgacgaccttctatcgcgccgagaaggaaggcgaggaccggctg
gagaacctgagcgaactggtcaacgccgccgaggccttcgtgacgcaggagggcttcggc
aaggacgcggtggcgctgccggtggacgagcactcgcccggcgcgatcgcggagggactg
ccgacggccgtcgccccggccgcgcccgcgacgccggacgccgagaccggcgagatcatg
tcgccgctggcggccttcctgacgcacgcctcgctggaagccggcgacaaccaggcgcag
gcaggccaggacgcgatccagctgatgacggtgcactcggccaagggcctggagttcgac
gcggtgttcatcaccggcctggaagagggcctgttcccgcatgagaactcgatgtccgac
tcggacgggctggaggaagagcgccggctgatgtacgtcgcgatcacgcgtgcgcgccag
cggctgtacatcagcttctgccagacgcggatgctgcacggccagacccgctacaacatc
aagagccgcttcatggaggagctccccgaggagacgctgaagtggctgacgccgcgcaac
cagggcttcggctcgggcttcgcgaaggactaccagcaggcgtggcagcgcggctcgggg
ctgaagtcgatggtgggcgcgggtcgcgtcgatccgtccgcgttcccgcaggcgccggtg
ccccaggcgatgaagcagtccgccgccgagaagaccggcgccgaacacggcggcctgcgc
gtcggcaagggcgtgttccacaacaagttcggtgagggcgtgctgctcacgctcgaaggc
agcggaccggatgcgcgcgcgcaggtgaacttcggccggcacggcacgaagtggctggcg
ctcagcgtggccaagctgaccccgatcgactga
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