Roseovarius sp. THAF27: FIU89_00635
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Entry
FIU89_00635 CDS
T06352
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh03030
DNA replication
roh03410
Base excision repair
roh03420
Nucleotide excision repair
roh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU89_00635 (polA)
03410 Base excision repair
FIU89_00635 (polA)
03420 Nucleotide excision repair
FIU89_00635 (polA)
03440 Homologous recombination
FIU89_00635 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roh03032
]
FIU89_00635 (polA)
03400 DNA repair and recombination proteins [BR:
roh03400
]
FIU89_00635 (polA)
Enzymes [BR:
roh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU89_00635 (polA)
DNA replication proteins [BR:
roh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FIU89_00635 (polA)
DNA repair and recombination proteins [BR:
roh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FIU89_00635 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FIU89_00635 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QFT79098
LinkDB
All DBs
Position
complement(127034..129832)
Genome browser
AA seq
932 aa
AA seq
DB search
MAFGKGHHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVSGFCNMLQKYVEDSTGADAP
THVAVIFDKGSHTFRNDMYPEYKANRDEMPEDLRPQIPLTRRATEAFNIACKEMEGYEAD
DMIATLAVQARDAGGRVTIISSDKDLMQLVGGGVEMLDAMKNRRIDREGVEEKFGVGPER
VVDVQALAGDSVDNVPGAPGIGIKTAALLINEFGSLEELLDRAGEIKQPKRRETLIEKRE
QIELSKKLVQLDCETPLDFTLDDLEVREPDPETLLAFLTEMEFRTLTKRIADALDVEAPA
IPEPTAPESGEDSAPDWPAIDPAKYERVSDMDALQGWIDRIIARGYVAVDTETTSLNEMQ
ADLVGICLSIDPGEACYIPLGHKDGNADDLFGSDALLDGQIPMQDALDALRPVLEDPSIL
KIGQNMKYDTKIMANYDIAMAPIDDTMLMSYALYSGMHGHGMDTLAERYLSHTPIPIKEL
LGTGKSAITFDRVPIDEAVKYAAEDADITLRLWHTFKPQLHRAKVTTVYETLERPLVPVL
AQMERNGIKVDKDTLSRMSAAFAQKMAGLEAEIHELAGEKFNVGSPAQLGDILFDKMSLP
GGKRGKNGKYSTPADVLEDLATEHDLPARVMDWRQVSKLKSTYTDALQDHIDPDTGRVHT
SYVQTGASTGRLASTDPNLQNIPIRTEEGRRIREAFVAEKGNTLVALDYSQIELRILAHI
ADIPALKEAFRDGQDIHAMTASEMFDVSMDDMTPEIRRRAKAINFGVIYGISGFGLARNL
RIPRADAQAFIDRYFERFPGIRTYMDDTVAFAKEHGFVQTLFGRKIHTPEIGAKGPRAGF
ARRAAINAPIQGTAADIIRRAMIRMPDAIADLPCRMLLQVHDELLFEVSDGAEDKVIDTA
RKVMEEAARPALHLDVPLVVDAGRGSNWAEAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcaagggacatcacctgcacctgatcgacgggtcggccttcatcttccgc
gcctaccacgcgctgcccccgctcacccgcaaatccgacgggttgcccatcggcgcggtc
tcgggcttttgcaacatgctgcagaaatatgtcgaagacagcaccggcgccgatgcgccc
acccatgtcgccgtgatcttcgacaagggcagccacaccttccgcaacgacatgtacccc
gagtacaaggccaaccgcgacgagatgccagaggacctgcgcccgcagatacccctcacc
cgccgcgcgaccgaggcgttcaacatcgcctgcaaggaaatggaaggctacgaggccgac
gacatgatcgccactctcgccgtccaagcccgtgacgccggcgggcgtgtcaccatcatc
agctccgacaaggacctgatgcagttggtcggcggcggcgtggaaatgctcgacgcgatg
aagaaccgccgcatcgatcgcgaaggggtcgaggaaaaattcggcgtcggccccgaacgc
gtcgtggacgtgcaggccctggccggcgacagcgtcgacaacgtccccggcgcccccggg
atcggcatcaagaccgccgcgctcctgatcaacgaattcggcagcctcgaggaacttctc
gaccgcgccggggaaatcaagcaacccaagcgccgcgagaccctgatcgaaaagcgcgaa
cagatcgaactgtcgaagaaactcgtccagctcgactgcgaaaccccgctcgatttcacc
ctcgacgacctcgaggtccgcgagcccgatcccgagaccctgctggccttcctgaccgag
atggaattccgcacgctgaccaagcgcatcgccgacgcgctggatgtcgaggcccccgcc
atccccgagcccaccgcgccggagtcgggcgaggacagcgcccccgactggcccgccatc
gaccccgcgaaatacgaacgtgtctcggacatggatgcgctgcaaggctggatcgaccgc
atcatcgcccgcggctacgtcgccgtggataccgaaaccacctcgcttaacgaaatgcag
gccgatctggtgggcatctgcctttccatcgacccgggcgaggcgtgctatatcccgctc
ggccacaaggacggcaatgcggatgatctcttcggctccgacgccctgctcgacggccag
atcccgatgcaggacgcgctcgacgcgctcagacccgtgctcgaggatccctcgatcctc
aagatcgggcagaacatgaaatacgacaccaagatcatggccaactacgacatcgccatg
gcgcccatcgacgacacgatgctgatgtcctacgcgctttattccgggatgcatggccac
ggcatggacacgctcgccgaacgctacctgtcgcacacgccgatccccatcaaggagctt
ctgggcaccggcaaatccgccatcactttcgaccgcgtgcccatcgacgaggccgtgaaa
tacgcagccgaggatgccgacatcaccctgcgcctctggcacacgttcaagccgcagctg
caccgcgcgaaagtcaccaccgtctacgagaccctcgaacgcccgctggtgcccgtgctg
gcgcagatggagcgtaacggcatcaaggtcgacaaggacacgctctcccgcatgtccgcc
gccttcgcccagaagatggccgggctcgaggccgagattcacgaactggccggcgaaaag
ttcaacgtcggctccccggcccaactgggcgatatcctcttcgacaagatgagcctgccg
ggcggcaagcgcggcaagaacggcaagtattccacccccgccgacgtgctcgaggacctc
gccaccgaacacgacctgcccgcccgggtgatggactggcgccaggtctccaagctcaag
tccacctataccgacgccctgcaggaccacatcgaccccgacacgggccgcgtccacacc
tcctacgtgcagaccggggccagcacgggccgcctcgcctcgaccgatcccaacctgcag
aacatccccatccgcaccgaggaaggccgccgcatccgcgaggccttcgtggccgaaaag
ggcaacaccctcgtcgcgctggactacagccagatcgaactgcgcatccttgcccatatc
gccgatatcccggcgctcaaggaggcgttccgcgacggtcaggacattcacgccatgacg
gcgtcagagatgttcgatgtttcgatggacgacatgacgcccgagatccgccgccgcgcc
aaggcgatcaatttcggcgtgatctacggcatctcgggctttggcctcgcgcggaacctg
cgcattccccgcgccgacgcacaggcctttatcgaccgctatttcgagcgttttcccggc
atccgcacctacatggacgacaccgtcgcctttgccaaggaacacgggttcgtccagacc
ctcttcggccgcaagatccacacgcccgagatcggcgccaaggggccgcgcgccggtttt
gcccgccgcgccgcaatcaacgcgccgatccagggcaccgccgccgatatcatccgccgc
gccatgattcgcatgcccgacgccatcgccgacctgccttgccgcatgctgctccaggtc
cacgacgaactgctgttcgaggtctccgatggcgccgaggacaaggtcatcgacaccgcc
cgcaaggtgatggaagaggccgcccgcccggccctgcatctggacgtgccgctggtggtc
gacgcaggccggggaagcaactgggccgaagcgcactga
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