Roseovarius sp. THAF27: FIU89_00940
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Entry
FIU89_00940 CDS
T06352
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh00300
Lysine biosynthesis
roh00470
D-Amino acid metabolism
roh01100
Metabolic pathways
roh01110
Biosynthesis of secondary metabolites
roh01120
Microbial metabolism in diverse environments
roh01230
Biosynthesis of amino acids
Module
roh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FIU89_00940 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FIU89_00940 (dapF)
Enzymes [BR:
roh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FIU89_00940 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
QFT79157
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Position
190605..191405
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AA seq
266 aa
AA seq
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MKMHGLGNDFVVLDGRARDVEVTPGLARAIGDRHRGIGCDQLAVIREGAGDAHLEFWNSD
GTTAAACGNATRCIARYLLDETGKESLHLTTSRGDLHAVDAGDGLTSVNMGAPFLDWQGV
PLAEEMDTLELPIEGGPVATGMGNPHCTFFVEDAEAIPLETFGPRYEHHPLFPERTNVQV
ASVIGPDYIRMRVWERGVGLTLASGSSSCAVAVAAARRGLTGRDVRVDLDGGTLRVEWRE
DGVWMTGPTMHVCDGMLTADFLRAAS
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcacgggctgggaaacgactttgtcgtcctggacgggcgtgcgcgtgacgtg
gaggtgacgccggggctggcgcgggccatcggcgaccggcatcgcgggatcggatgcgac
cagctcgcggtgatccgcgagggtgcgggcgatgcgcatctggagttctggaacagcgat
ggcacgacggccgccgcctgcgggaacgcgacgcggtgcattgcccggtatctgctggac
gagacgggcaaggaaagcctgcacctgaccacgtcgcgtggggatcttcatgccgtcgat
gcgggggatgggctgacctcggtgaacatgggcgcgccgttcctggactggcagggcgtg
ccgctggccgaggagatggacacgctggaactgcccatagagggcgggccggtggccacg
ggcatgggcaatccgcactgcacgttcttcgttgaggatgccgaggcgatcccgttggaa
acattcggtccacggtacgagcatcacccgctcttccccgagcgcaccaacgtgcaggtg
gccagtgtcatcggccccgattacatccggatgcgggtgtgggagcggggcgtgggtctg
acgttggcctcggggtcgtcgtcttgcgcggtcgcggtggccgcggcgcggcgcgggctg
actgggcgggatgtgcgggtcgatctggacggaggcacgctgcgggtggagtggcgcgag
gatggcgtctggatgacaggcccgacgatgcatgtttgcgacggcatgctgacggcggat
ttcctgagggctgcgtcatga
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