Roseovarius sp. THAF27: FIU89_01320
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Entry
FIU89_01320 CDS
T06352
Symbol
gntR
Name
(GenBank) HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
roh
Roseovarius sp. THAF27
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roh03000
]
FIU89_01320 (gntR)
Transcription factors [BR:
roh03000
]
Prokaryotic type
Helix-turn-helix
LacI family
FIU89_01320 (gntR)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
Sigma54_DBD
Sigma70_r4
HTH_3
HTH_31
HTH_24
TrmB
HTH_IclR
HTH_23
HTH_10
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QFT79233
LinkDB
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Position
complement(256016..257044)
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AA seq
342 aa
AA seq
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MTSQDNRPLTLRDVSEASGVSEMTVSRVLRNRGDVSDATRSRVLAAAKTLGYVPNKIAGA
LASQRVNLVAVIIPSMSNMVFPEVMTGISEALDETDLQPVVGVTGYRPEKEEKVLYEMLS
WRPSGVIIAGMDHSDAARAMLRASGIPVVEIMDVDGTAIDSVVGISHRRAGSQMAKAIIK
AGYRRIAFLGTKMPLDHRARKRFEGFTETLAKAGIEIEDREFYSGGSALKKGREMTRDVL
ARSPDLDFIYYSNDLIGAGGLLYLTEQGVDIPGEVGLAGFNGVDLIKGLPRELATMDSCR
QEIGRRAADLIVTRAASVDGQGAPSRIVLEPTLTYGDTLRRL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcacaggataaccgaccgctcacgcttcgcgacgtatccgaggcttcgggcgtg
tccgaaatgaccgtcagccgcgtcttgcgcaatcgcggcgacgtgtccgatgccacccgc
agccgcgtcctcgccgccgccaagacgctgggctacgtgccgaacaagatcgccggcgcg
ctggccagccagcgggtgaaccttgtcgcggtcatcattccctcgatgtccaacatggtc
ttccccgaggtcatgaccgggatctccgaggccctcgacgagactgatctgcagcccgtg
gtcggcgtcaccggctaccgccctgagaaagaggaaaaggtcctctacgaaatgctgtcc
tggcgcccctcgggcgtgatcatcgccggcatggaccattccgacgcggcgcgcgccatg
ctgcgtgcctccggcatcccggtggtcgagatcatggatgtggacggcaccgcgatcgac
tcggtggtcggcatctcgcaccgccgcgccggctcgcagatggccaaggcgatcatcaag
gccggataccggcgcatcgccttcctcggcaccaagatgccgctcgaccaccgcgcccgc
aaacgcttcgaagggttcaccgaaaccctcgccaaggccgggatcgagatcgaggaccgc
gagttctactccggcggttcggcgctgaagaagggacgcgagatgacccgcgacgtgctg
gcccgcagccccgacctcgacttcatatactattccaacgacctgatcggcgcgggcggc
ctgctctacctcaccgagcagggcgtcgacattcccggcgaggtgggtcttgcgggcttc
aacggtgtcgacctgatcaagggcctgccgcgcgaactggccaccatggattcctgccgc
caggaaatcggccgccgcgccgcggacctgatcgtgacccgcgccgccagcgtcgacggc
cagggcgcgccgtcgcgcatcgtcctggagcccacgctcacctacggcgacaccctgcgc
cgcctttag
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