Roseovarius sp. THAF27: FIU89_05885
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Entry
FIU89_05885 CDS
T06352
Name
(GenBank) Soluble hydrogenase 42 kDa subunit
KO
K00830
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:
2.6.1.44
2.6.1.45
2.6.1.51
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh00250
Alanine, aspartate and glutamate metabolism
roh00260
Glycine, serine and threonine metabolism
roh00630
Glyoxylate and dicarboxylate metabolism
roh00680
Methane metabolism
roh01100
Metabolic pathways
roh01110
Biosynthesis of secondary metabolites
roh01120
Microbial metabolism in diverse environments
roh01200
Carbon metabolism
roh01210
2-Oxocarboxylic acid metabolism
roh04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FIU89_05885
09102 Energy metabolism
00680 Methane metabolism
FIU89_05885
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FIU89_05885
00260 Glycine, serine and threonine metabolism
FIU89_05885
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FIU89_05885
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
roh01007
]
FIU89_05885
Enzymes [BR:
roh01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.44 alanine---glyoxylate transaminase
FIU89_05885
2.6.1.45 serine---glyoxylate transaminase
FIU89_05885
2.6.1.51 serine---pyruvate transaminase
FIU89_05885
Amino acid related enzymes [BR:
roh01007
]
Aminotransferase (transaminase)
Class V
FIU89_05885
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
3HCDH_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
QFT80137
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Position
1164095..1165291
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AA seq
398 aa
AA seq
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MSGAGGRPYLAIPGPSVMPDRVLRAMNRASPNIYAGELVDMMPKLVADLCGVARTRGHAA
IYIGNGHAAWEASLANTVQPGEKVLVLATGRFGHGWAEVAEARGIEVQLLDFGRQAPVDC
QAVEDALRADKAHEIKAVLVTHVDTSSSVLNDVPAVRAAMDAVGHPALLAADCIASLACD
RFEMDAWGVDVMVAGSQKGLMTPPGLGFVFFNDKASDVRRTVPRVSRYWDWVPRTEPELF
YQYFGGTAPTHHLYGLREALDMLGEEGVEAVWARHERLARAVWAACEVWGAEGPLRLNIA
DAAQRSRAVTSLAVGKPLGEDLRQWVEAHMGVTLGIGLGMQTEDDPRSTGYFRIGHMGHL
NGHALLGVLGAAEAGLTALNIAHGDGAVQRAAQVLAAP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtgccggcggacgcccctacctggccattcccggcccttcggtcatgcccgac
cgggtgctgcgcgcgatgaaccgcgcctcgcccaacatctatgcgggcgagctggtggac
atgatgccgaagctggtggcggacttgtgcggggtcgcgcgcaccaggggccacgcggcg
atctatattggcaacggacacgccgcgtgggaggcgagcctggccaacacggtgcagccc
ggggaaaaggtgttggtgctggcgacggggcggttcgggcatggctgggccgaggtcgcc
gaggcgcgcgggatcgaggtgcagttgctggatttcgggcggcaggcgccggttgactgt
caggcggtcgaggacgcgctgcgcgcggataaagcacatgaaatcaaggcggtgctggtc
acgcatgtggacacgtcttcttcggttctgaacgatgtgcctgcggtgcgggcggcgatg
gacgcggtggggcatcccgcgctgctggcggccgactgcattgcctcgctggcctgtgac
cggttcgagatggacgcttggggcgtcgacgtgatggtcgcgggcagccagaaggggctg
atgacgccgccggggctgggattcgtatttttcaacgacaaggcctcggatgtgcgccgg
acggtcccgcgcgtcagccggtattgggattgggtgccgcgcaccgagccggaattgttc
taccagtatttcggtggcacggcgccgacgcatcacctgtacggtctgcgcgaagccctt
gatatgcttggagaagagggggtcgaggccgtctgggcccggcacgagcggctggcccgc
gcggtctgggccgcgtgcgaggtctggggcgcggaggggccgctgaggttgaacattgcg
gacgcggcacagcgcagtcgagcggtgacctcgctggcggttggcaagcccttgggcgaa
gacctgcgccagtgggtcgaggcgcatatgggcgtcacgctggggatcggattgggcatg
cagaccgaggatgacccgcgcagcaccggctatttccggatcgggcatatggggcatctg
aacggtcacgcgctgctgggcgtgctgggggctgccgaggcggggctgactgcgctgaat
atcgcgcatggcgacggcgcggtgcagagggcggcgcaggttctggccgcgccttag
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