Roseovarius sp. THAF27: FIU89_07355
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Entry
FIU89_07355 CDS
T06352
Symbol
polC
Name
(GenBank) DNA polymerase III PolC-type
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh03030
DNA replication
roh03430
Mismatch repair
roh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FIU89_07355 (polC)
03430 Mismatch repair
FIU89_07355 (polC)
03440 Homologous recombination
FIU89_07355 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roh03032
]
FIU89_07355 (polC)
03400 DNA repair and recombination proteins [BR:
roh03400
]
FIU89_07355 (polC)
Enzymes [BR:
roh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FIU89_07355 (polC)
DNA replication proteins [BR:
roh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FIU89_07355 (polC)
DNA repair and recombination proteins [BR:
roh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FIU89_07355 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QFT80422
LinkDB
All DBs
Position
complement(1455791..1457212)
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AA seq
473 aa
AA seq
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MLSRLSLRLRIFLFFCLLATGAVALAGAALWFGWSRAQGTLPAAPFVTAFIVFALLNTAL
LAGVWLLFDENLAKPIQMLSTNLRLRAHSGVDKDLCPESTKYLGDLATAADAVTRTLSAG
VMDTAAQVARETERLRTESKRLTALLTEIPVATILVNPAQEIVLYDGQAADILRQIAPPR
LKAPLGDYFDAAGLAAAQDQMSRTKAEISTELHDHSGARRYKVRLKPLGEGGYMLLLDTQ
ETEVDPTKARPLVYDFDLMETAQACDIRDTPLRSLCCVAFDTETTGLSPQDDHVIQLGAV
RILNGRLVEGEVIDTYVDPKRPIPPASTKIHRITDDDVRNAPDFDTVGRDFHHFARDAVL
VAHNAPFDIGFFRRSADRMGVAWDHPVLDTVLLSAVVFGTTAEHSLDALCDRLGITIPPD
LRHTALGDAQATAEALVKLTPLLEGKGLTTFGHVITETRRHGRLIQDLNTSHG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccgcctcagcctccgcctgcgcatcttcctgtttttctgccttctggcgacg
ggcgcggtggcactggccggcgcagcgctctggttcggctggtcgcgggcccaaggcacg
cttcccgccgcgccctttgtcaccgccttcattgtcttcgcacttctcaacaccgcgctt
ctggccggtgtctggctgctgttcgatgaaaacctcgccaagcccatccagatgctctcg
accaacctgcgcctgcgcgcccattccggcgtcgacaaggacctgtgccccgaaagcacg
aaatacctcggtgatctcgccaccgccgccgacgccgtcacccgcacgctcagcgcgggc
gtcatggacaccgccgcacaggtcgcccgcgaaaccgaacgcctgcgcacggaatccaag
cgcctgacagccttgctcaccgagatccccgtcgccacgatcctcgtgaacccggcccag
gaaatcgtgctctacgacggacaggccgccgacatcctccgccagatcgccccgccccgc
ctcaaggctccgctcggcgactatttcgatgccgccggcctcgccgccgcccaggaccaa
atgagccggaccaaggccgaaatctccaccgaactgcacgaccactccggcgcccgacgc
tacaaggtccgtcttaaaccccttggcgaaggcggctacatgctccttctcgacacccag
gaaaccgaggtcgacccgaccaaggcccgcccgctggtttatgacttcgacctgatggaa
accgcgcaggcctgcgatatccgcgacacgccgctgcggtcactctgctgtgtcgccttc
gacaccgaaaccaccggactttcgccgcaggacgatcacgtgatccaactcggtgccgtg
cgcatcctcaatgggcgcctcgtcgagggcgaggtcatcgacacctatgtcgaccccaaa
cgcccgatcccgcccgcctcgacgaaaatccaccgcatcaccgacgacgacgtgcggaac
gccccggatttcgacaccgtgggccgcgatttccaccatttcgcccgcgacgccgtgctg
gtcgcccataacgcgcccttcgacatcggcttcttccgccgctccgccgaccgcatgggc
gtcgcgtgggaccaccccgtcctcgacaccgtgctgctgtccgccgtcgtcttcggcacc
accgccgaacactcgctcgacgccctctgcgaccgcctcgggatcaccattccacccgac
ctgcgccacaccgccctcggcgacgcgcaagcgacggccgaggcgctggtgaaactcacc
cccctgctcgaaggcaagggcctgaccaccttcggccacgtcatcaccgaaacccgccgt
cacggccgcctgatccaggacctcaacacctcgcacggctga
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