Roseovarius sp. THAF27: FIU89_10490
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Entry
FIU89_10490 CDS
T06352
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
roh
Roseovarius sp. THAF27
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roh03032
]
FIU89_10490 (gyrA)
03400 DNA repair and recombination proteins [BR:
roh03400
]
FIU89_10490 (gyrA)
Enzymes [BR:
roh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FIU89_10490 (gyrA)
DNA replication proteins [BR:
roh03032
]
Prokaryotic type
DNA Topoisomerases
FIU89_10490 (gyrA)
DNA repair and recombination proteins [BR:
roh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FIU89_10490 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SH3_19
Motif
Other DBs
NCBI-ProteinID:
QFT81038
LinkDB
All DBs
Position
2100423..2103185
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AA seq
920 aa
AA seq
DB search
MNDTPETPENEDEMPPERPVHDGPSVSIIEEMKTSYLDYAMSVIVSRAIPDLRDGLKPVH
RRILYAMHETGNTHDKAYRKSARPVGDVMGKYHPHGDSAIYDALVRMAQDFSMSLPLLDG
QGNFGSMDGDNPAAMRYTEVRMDKPAGALLADIEKETVDFQDNYDGKDREPTVLPARFPN
MLVNGAGGIAVGMATNIPPHNLGEVIDATLALIENPDLSSEQLIEYIPGPDFPTGGIMLG
RSGARKAYIEGRGSVIVRAKTRIEEIRKDRYAIVIEEIPYQVNKSAMIEKIAETVREKRI
EGITHVQDESDRHGVRVVVELKRDATAEVVLNQLFRFTPMQTHFGCNMLALNGGRPEQLT
LYGFLSAFISFREDVVARRTAYDLRKARERSHVLCGLAVAVSNVDEVVATIRASADAAEA
REKLMTRRWPAGDILEYIALIDDPTHKANDDGTYNLSETQARAILELRLQRLTQLGVKEV
TDELQELAGKIKEYLAILASRERIMQIISDELTEVKEQFAVPRRTEIVDWSGDMEDEDLI
EREDMVVTVTSGGYIKRTALADFRAQKRGGKGLSGMQTKEEDVVTTLFVANTHTQLLFFT
TDGMVYKLKTWRLPLGGRTSKGKAIVNILPIPTGVSIAAIMPVDRDESEWDDLQVVFATD
HGTVRRNKLSDFTNVMRNGKIAMKFEGESEGWSLINARIASNDDDVMLVTNSGRAIRFPA
TDVRVFNSRASTGVRGIRLSNGDRVVSMSIISHFEATPDERAAYLKMRRQMAGADDDETG
EEEGNAETPLPAERFEEMKAAENLILTITEQGAGKLSSSHDYPVRGRGGMGVQAMDKAMR
GGALVASFPVQIEDQIMLATSRGQSIRVPVDGISFRSRSAGGVKVFNTGKGEKVVSVAWI
AETGEDDLDEGAPAESQETT
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgacacgccggaaacccctgaaaacgaagacgaaatgccgcccgaacgccccgtc
catgacgggccgtcggtgtcgatcatcgaagagatgaagacgtcctacctggactacgcc
atgtcggtgatcgtcagccgggccattcccgacctgcgcgacggcctgaaacccgtgcac
cgccgcatcctttacgccatgcacgaaaccggcaacacgcatgacaaggcctaccgcaaa
tccgcccgccccgtgggcgacgtcatgggtaaataccacccccacggcgactctgcgatc
tacgacgcgctggtgcgcatggcgcaggatttttccatgtctttaccgctacttgacggt
caaggcaacttcggctccatggacggcgataaccccgccgccatgcgttacaccgaggtc
cgcatggacaagcccgcgggcgcgctcttggcggatatcgagaaggaaaccgtcgatttc
caggacaactacgacggcaaggaccgcgagcccacggtcctgcccgcgcgtttccccaac
atgctggtcaacggcgccggcggcatcgccgtcggcatggccaccaacatcccgccgcac
aacctgggcgaggtcatcgacgccacgctggccctgatcgagaaccccgacctgagttcc
gaacagctgatcgaatacatccccggcccggactttcccaccggcggcatcatgctcggc
cgctccggtgcgcggaaggcgtatatcgaggggcgcggcagcgtgatcgtgcgcgccaag
acccggatcgaggagatcaggaaagaccgctacgcgattgttatcgaagagattccctat
caggtgaacaagtcggcgatgatcgagaagatcgccgagaccgtgcgcgagaaacgcatc
gagggcatcacccatgtgcaggacgaatccgaccgtcacggcgtgcgcgtggtggtcgag
ctgaagcgcgacgccaccgccgaggtggtgctgaaccagctcttccgcttcaccccgatg
cagacgcatttcggctgcaacatgctggcgctgaacggcgggcggcccgaacagctgacg
ctttacgggttcctcagcgccttcatctcgttccgcgaggacgtggtggcccggcgcacc
gcctatgacctgcgcaaggcccgcgaacgcagccacgtgctgtgcggcctggccgtggcg
gtcagcaatgtcgacgaggtggtcgccacgatccgcgcctccgccgatgccgccgaggcc
cgtgaaaagctgatgacccgccgctggcccgcgggcgatatccttgaatacatcgcgctg
atcgacgacccgacgcacaaggcgaacgacgacggcacctacaacctcagcgaaacgcag
gcccgcgccatcctggaactgcgcctgcaacgcctgactcagcttggcgtgaaagaggtc
accgacgagctgcaggaactggcgggcaagatcaaggaatacctcgcgatcctcgccagc
cgcgagcgaatcatgcagatcatctcggacgagctgaccgaggtgaaagagcaattcgcc
gttccccgccgcaccgagatcgtcgactggtccggcgacatggaggacgaggacctgatc
gagcgcgaggacatggtcgtgaccgtgacctcgggcggctatatcaagcgcaccgcacta
gccgatttccgcgcgcagaaacgtggcggcaaaggcctgtcgggcatgcagaccaaggaa
gaggacgtggtgaccacgctgttcgtggccaatacgcatacccagcttctgttcttcacc
accgacgggatggtctacaagctgaagacctggcggctgcctctgggtgggcgaacgtcg
aagggaaaggcgatcgtgaacatcttgccgatccccaccggggtcagcatcgcggcgatc
atgccggtggaccgtgacgagagcgaatgggacgacctgcaagtggtctttgccaccgac
cacggaaccgtccgccgcaacaaactgagcgatttcaccaacgtcatgcgcaacggcaag
atcgcgatgaagttcgaaggcgaaagcgaaggctggtccttgatcaatgcacgcatcgcc
tcgaacgacgatgacgtgatgctggtcacgaattccggtcgggccatccgtttcccggcg
accgatgtgcgggtctttaactcgcgcgcctcgacgggcgtacgcggcatccgtctgagc
aatggcgaccgggtggtgtcgatgtcgatcatcagccatttcgaggccacgccggacgaa
cgcgccgcgtacctgaagatgcgcagacagatggctggggccgatgacgacgagacgggc
gaggaagagggcaacgcggaaacgccgctgccggccgagcgctttgaagagatgaaggcg
gctgagaatctgattctgaccatcaccgaacagggtgccggcaaattgagttccagccat
gattacccggtccgcggacgcggcggcatgggtgtccaggccatggacaaggccatgcgc
ggcggggctttggtggcctccttcccggttcagatcgaggaccagatcatgctggcaaca
tcacgaggccagtcgatccgcgttccggttgacggaatctcgttccggtcccgcagcgcg
ggcggcgtgaaggtcttcaacaccggaaagggagagaaggtcgtcagcgtcgcctggatt
gccgagaccggcgaagacgacctcgatgaaggcgcccccgcggaaagccaggaaaccacc
tga
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