Roseovarius sp. THAF27: FIU89_14655
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Entry
FIU89_14655 CDS
T06352
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh03410
Base excision repair
roh03430
Mismatch repair
roh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FIU89_14655 (recJ)
03430 Mismatch repair
FIU89_14655 (recJ)
03440 Homologous recombination
FIU89_14655 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roh03400
]
FIU89_14655 (recJ)
DNA repair and recombination proteins [BR:
roh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
FIU89_14655 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FIU89_14655 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FIU89_14655 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QFT81862
UniProt:
A0A5P9H1B2
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All DBs
Position
2892337..2894079
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AA seq
580 aa
AA seq
DB search
MSFLGVARSLTDRCWVGPTPAIDRLAEAMAQETALPRPLCQTLCRLDVAPSDATTYLEPK
LRDLMPDPRSLKDMETAAARFLAAVERNEKIAVFADYDVDGGCSAALLIDWLRQMGRSAT
LYVPDRIDEGYGPNAPAMTELAAAHDLILCVDCGTLSHDALAAVTSADVLVLDHHLGGES
LPPALAVVNPNRQDESGDLAHLCAAAVVFLMLVEAGRQLREAGKPGPDLMAMLDLVALAT
VADVAPLRDVNRAFVRTGLAVMGKRLRPGLVALCDIGRVNTAPSSYHLGFVLGPRVNAGG
RVGRADLGARLLACTDPAEAISLAEKLDELNTERRDVETVVRAAALDQAETRGLDAPLVW
AAGDGWHPGVVGIVASRLKEATNRPAIVIGFDGDEGKGSGRSVSGVDLGHAIQRLAAEGL
LLKGGGHKMAAGLTVARANLEAAMDRLSELLARQGAGSTGPADLTLDGILMPGAASPELV
NQIENAGPFGAGAPGPRYAFPDMTIGFAKRVGESHLKLRFGDGTGANLDAIAFGAYDTLL
GKTLEEHGGQRFHLAGRLDINSWGGRQTVQLRLEDAALAG
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctgggcgtcgcacgctctttgaccgaccgctgctgggtcggcccaacgccg
gcaatagaccggctggcagaagcaatggcgcaagagacggcacttccgcgcccgctttgc
cagacgctctgccgtctcgacgtggctccatccgatgccacgacctaccttgagcccaag
ctgcgcgatctaatgcccgacccccgcagcctcaaggacatggaaaccgccgcggcgcgc
tttctcgccgcggtcgagcggaacgagaagatcgccgttttcgccgattatgatgtcgat
gggggctgttctgctgccttgctgatcgactggcttcggcagatgggacgctccgcaacg
ctttacgttcccgaccgcatcgacgagggctatgggccgaacgctccggccatgaccgaa
ttggcggcggcccatgacctcatcctgtgtgtcgattgcggcacgctcagtcatgacgcg
cttgcagcggtcacaagcgccgacgttctggtcctcgatcaccatctgggcggcgaaagc
cttccgcccgcattggcggtcgtcaatccgaaccggcaagatgaaagcggcgacctggcg
cacctctgcgctgccgccgtggtgttcctcatgctggtcgaagccggtcgccaattgcgc
gaagccggaaaaccgggcccggacctgatggcgatgctcgatctggtggcccttgccact
gtcgcggacgtggcgccgctgcgcgacgtcaatcgcgcgttcgtgcgaacgggcctcgcg
gtcatgggcaaacgccttcgccccgggcttgtggcgctgtgcgatatcggacgcgtcaat
accgccccgtcctcgtatcacctgggctttgttcttggcccccgtgtcaatgccggcggc
cgggtgggccgcgctgatctcggcgctcgcctgcttgcctgcaccgatccggccgaggcc
atctccctggccgaaaagctcgacgaactgaacaccgaacgccgcgatgtcgaaaccgtc
gttcgggccgcggcgctggaccaagctgaaacccgcggtctcgatgcaccactcgtctgg
gcagcgggtgacggatggcaccccggcgttgtcggcatcgtcgcctcgcgtctgaaggaa
gccacgaaccgcccggccatcgtgatcggattcgacggcgacgagggaaagggctctggc
cgatccgtttcgggcgtcgacctgggccacgccattcaacgcctggccgccgaaggcctt
ttgctgaaaggcggagggcacaaaatggcagctggccttacggtcgcacgcgccaacctt
gaggcggctatggaccggctgtcagaattgcttgcgcgacaaggcgccggatcgaccggg
ccggcggatcttaccttggacggtattctgatgcccggcgccgcgtccccggaactggtc
aatcaaatcgagaacgcaggcccctttggcgccggcgctcccggcccgcgctacgcgttc
ccggacatgacgatcggtttcgccaaacgcgtaggcgaaagccacctgaagctacgcttc
ggcgacggcaccggtgcgaacctcgacgccatagcgttcggtgcctacgataccctattg
ggaaagaccctggaagagcatggtggccaacgctttcatctggcgggacgcctcgacata
aacagctggggcggacgtcagactgtccaacttcgcctcgaggacgcggctttggcgggc
tga
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