Roseovarius sp. THAF27: FIU89_15750
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Entry
FIU89_15750 CDS
T06352
Name
(GenBank) Deoxyribodipyrimidine photo-lyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
roh
Roseovarius sp. THAF27
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roh03400
]
FIU89_15750
Enzymes [BR:
roh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
FIU89_15750
DNA repair and recombination proteins [BR:
roh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
FIU89_15750
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DPRP
CDI
Motif
Other DBs
NCBI-ProteinID:
QFT82079
UniProt:
A0A5P9H4Z6
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Position
complement(3146364..3147893)
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AA seq
509 aa
AA seq
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MVKRLILVLGDQLSNNLSALRDADKERDIVVMAEVADEASYVGHHPKKIALIFAAMRHFA
EELQDDGWQVAYSRLDDDDTSKSIVGELMRRGQEHDTTEVVATRPGEWRLVEALDNAPLT
VTMLPDDRFVASLDEFNTWAEGRKSLRMEYFYRDMRRKTGLMMEGDEPAGKKWNYDHENR
KPASGDMLRSKPMEFTPDQMTEEVLDLVEKKFDKNFGVLRPFTHAVTRGQALRALDHFAK
NLLDCFGDYQDAMLQDDRFLHHSLLSQYLNIGFLDPVEICTRVEEEWKAGNVPINAAEGF
IRQIIGWREYVRGIYFREGPDYVTRNALGHERDLPWMYWGGETQMNCVAHAVDQTRELAY
AHHIQRLMVTGNFALLAGVDPHQVHEWYLAVYHDAFEWVEAPNTIGMSQFADDGIIASKP
YVSSGNYIDKMSDYCGSCAYSVKDKTGEKACPFNLLYWDFLVRHREKFSNNPRMGQMYAT
WDRMKEDRKDAVLKGAKRILDRLDAGEIV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtggtgaagcgtctgattctggtactgggggaccagctgagcaataacctgtcggcgctg
cgcgacgcggacaaggagcgtgacatagtggtgatggccgaagtcgcggacgaggccagt
tacgtggggcatcatccgaagaaaatcgcgctgatcttcgcggccatgcgccattttgct
gaagaattacaggatgatggctggcaggtcgcgtattcgcgactggacgacgatgacacg
tcgaaatccatcgtcggcgaattgatgcgacgtgggcaggagcatgacacgaccgaggta
gtcgcgacccgacccggcgagtggcggctggtcgaagcgctggacaatgccccgttgacg
gtgacgatgctgcccgatgaccgcttcgtggcctcgctggatgagttcaacacatgggcc
gagggacgcaagtccttgagaatggagtatttctatcgcgacatgcggcggaaaacgggc
ctgatgatggagggggatgagccggcgggcaagaagtggaattacgaccacgagaaccgc
aagcccgcgtcgggcgacatgctgcgctcgaagcccatggagttcacgccggaccagatg
accgaggaggtcctggatctggtcgagaagaaattcgacaagaatttcggtgtgttgcgt
ccctttactcatgctgtgacccgggggcaggcgctgcgggctctggatcatttcgccaag
aacttgctggactgtttcggcgattaccaggacgcgatgctgcaggatgaccggttcctg
caccattcgctgttatcgcagtatttgaacatcggatttctggatcctgtggaaatctgc
acccgtgtggaagaagaatggaaagccgggaacgtgccgatcaatgcggcggagggcttt
atccggcagatcatcggctggcgggaatatgtgcgggggatctatttccgggaaggtccg
gactatgtgacgcgcaatgcgctggggcatgagagggatttgccctggatgtattggggc
ggtgaaacgcagatgaattgcgtcgcccatgccgttgatcagacacgggaattggcctat
gcgcaccacatccagaggttgatggtgacgggcaatttcgcgcttctggcgggggtcgat
ccgcaccaggtgcacgagtggtacctggcggtttaccacgacgcgttcgaatgggtggaa
gcgccgaacacaatcgggatgagccagttcgcggatgacgggatcattgcgtcgaagccc
tatgtcagctcgggcaactatatcgacaagatgtcggattactgcggttcctgcgcctat
tccgtcaaggacaagaccggcgaaaaagcgtgtcctttcaatcttctgtactgggacttt
cttgtaaggcaccgggagaaattctcgaacaatccgcgcatggggcagatgtatgccacg
tgggaccggatgaaggaggatcgcaaggacgcggttctgaaaggcgcgaaacgcatcctc
gaccggctggatgcgggcgaaatcgtgtga
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