Roseovarius sp. THAF27: FIU89_15920
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Entry
FIU89_15920 CDS
T06352
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
roh
Roseovarius sp. THAF27
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
roh03009
]
FIU89_15920 (rimO)
Enzymes [BR:
roh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FIU89_15920 (rimO)
Ribosome biogenesis [BR:
roh03009
]
Prokaryotic type
ribosomal protein modification factors
FIU89_15920 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QFT82113
LinkDB
All DBs
Position
3183450..3184838
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AA seq
462 aa
AA seq
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MSTNPPDLRPDLARARVTETPRKGQPVIGMVSLGCPKALVDSERILTRLRAEGYGISPDY
SGADAVIVNTCGFLDSAKAESLDAIGEALAENGRVIVTGCLGAEPEYITGTHPRVLAVTG
PHQYEQVLDAVHTAVPPSPDPFIDLLPEAGVKLTPRHYSYLKISEGCNHKCKFCIIPDMR
GRLSSRPGHAILREAEKLVGNGVRELLVISQDTSAYGLDRKYDVNPWKDGDLRSHIVDLS
RALGELGAWVRLHYVYPYPHVRELIPLMADPKNGVLPYLDIPFQHAHPDVLKRMARPAPG
AKTLDEIAAWRAICPDLTLRSTFIVGYPGETEAEFQTLLDWLDEAQLDRVGCFKYENVEG
ARSNDLPGHVPEEVKQDRWDRFMEKAQTISVDKLAAKVKSVQEVIVDDIDEEGIATCRTK
ADAPEIDGCLFIDEHTEGLSVGDIVTVEVDEAGEYDLWGQIK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccaacccacccgatctgcgccccgacctcgcgcgcgcacgcgtcaccgagacg
ccccgaaagggccagccggtgatcggcatggtgtccctgggctgtcccaaggcgctggtc
gacagcgaacgcatcctgacgcgcctgcgggccgagggctatgggatctcgcccgactat
tccggtgccgatgcggtgatcgtgaacacttgcggctttcttgacagcgccaaggccgaa
agcctcgacgccatcggcgaggcgcttgcggagaacggccgcgtcatcgtcacgggctgt
ctgggggccgaacccgaatacatcactggcacccatccccgcgtcctcgcggtgactggc
ccgcaccagtatgagcaggtgctcgacgcggtgcacaccgccgtgccgcccagccccgac
cccttcatcgaccttctgcccgaggcgggggtcaagctgacccctcgccactacagttac
ctcaagatttcagagggctgtaaccacaagtgcaagttctgcattatccccgacatgcgc
gggcgtctttcctcgcgccccggccacgccattctgcgcgaggccgagaaactggtcggg
aacggcgtgcgcgaacttctggttatttcccaggatacaagcgcttacgggctggaccgc
aagtatgacgtgaacccgtggaaggatggcgacctgcgcagccacatcgtcgatctgtcc
cgcgcactcggagagctcggcgcgtgggtccggctgcactacgtctatccctacccgcat
gtacgcgagctcatccctctcatggccgacccgaaaaacggcgtcctgccctatctcgac
atcccgttccagcacgcccacccggacgttctgaaacgcatggcccgccccgcccccggg
gccaaaaccctggatgaaatcgccgcctggcgcgcgatctgccccgacctgacgctgcga
tcaaccttcatcgtcggctatcccggcgaaaccgaggcggaattccagaccctgctcgac
tggctcgacgaggcacagctcgaccgcgtcggctgcttcaaatacgaaaatgtcgagggc
gcccgctcgaacgacctccccggccacgtgcccgaagaggtcaagcaggaccgctgggat
cgcttcatggaaaaggcacagaccatttctgtggataaactggccgccaaggtcaaatct
gtgcaagaggtgatcgtcgacgatatcgacgaggagggcatcgccacctgccgcaccaag
gcggatgcaccggaaatcgacggctgtctcttcatcgacgagcacaccgagggcctgagc
gtcggcgacatcgtcaccgtcgaggtggacgaagccggggagtatgacctgtggggtcag
attaaatga
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