Roseovarius sp. THAF27: FIU89_16065
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Entry
FIU89_16065 CDS
T06352
Symbol
aspS
Name
(GenBank) Aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FIU89_16065 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
roh01007
]
FIU89_16065 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roh03016
]
FIU89_16065 (aspS)
03029 Mitochondrial biogenesis [BR:
roh03029
]
FIU89_16065 (aspS)
Enzymes [BR:
roh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FIU89_16065 (aspS)
Amino acid related enzymes [BR:
roh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FIU89_16065 (aspS)
Transfer RNA biogenesis [BR:
roh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FIU89_16065 (aspS)
Prokaryotic type
Other AARSs
FIU89_16065 (aspS)
Mitochondrial biogenesis [BR:
roh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FIU89_16065 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QFT82142
LinkDB
All DBs
Position
complement(3210505..3212283)
Genome browser
AA seq
592 aa
AA seq
DB search
MHAYRSHTCAELTKSNVGDTVRLSGWVHRIRDHGGVLFIDLRDHYGMTQVLCDPDSAVFS
EVEKLRSEWCIRIDGEVKARDESLVNPKIPTGEIEVFIRDVEVLGSAKELPLIVFGDQEY
PEETRLRYRYLDLRREAMQENMKLRSDVVASIRRRMWDIGFREYQTPIITASSPEGARDF
LVPSRLHPGKFYALPQAPQQFKQLIMVSGFDKYFQIAPCFRDEDPRADRSPTDFYQLDME
MSFVEQQDVFDTIQPVIKGLFEEFGGGKAVDQEWEQISYRDAALWYGTDKPDLRNPIKMQ
DVSEHFRGSGFAIFAKLLEQDGTEIRAIPAPTGGSRKFCDRMNAFAQKEGLPGMGYIFWR
DQGDGMEAAGPLAKNIGPERTEAIREQLGLGVGDAAFFLGGKPAAFERVAGKARVTIGEE
LGLTDENRFAFAWIVDFPMYEADEESGEIDFSHNPFSMPQGGIEALEGDPLKVLGYQYDL
SCNGYELVSGAIRNHKLEAMIKAFELAGYDEAEVRKRFGGMVGAFQYGAPPHGGCAAGID
RIVMLLADEQNIREVIMFPMNQRAEDLMMNAPSEPASDQLMELGLRVLPREE
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcatatcgcagccatacctgcgccgagctgacgaaatcgaatgtcggggacacc
gttcgcctgtcgggctgggtgcaccggatccgggaccatggcggggttctgttcatcgat
ttgcgcgaccattacggcatgacacaggtgctgtgcgatcccgacagtgcggtgttttcc
gaggtcgaaaagctgcgcagcgagtggtgcatccgcatcgacggcgaggtgaaggcgcgc
gatgagagcctggtgaaccccaagatcccaaccggcgagatcgaggtgttcattcgcgat
gtcgaggtgctgggcagcgccaaggagctgccgctgatcgtgttcggggatcaggaatac
cccgaagagacgcggctgcgctatcgctacctggaccttcggcgcgaggcgatgcaggag
aacatgaagctgcggtcggacgtggtggccagcatccggcggcggatgtgggatatcggg
tttcgcgagtaccagacgccgatcatcacggcatcgagccccgagggcgcgcgcgacttc
ctggtgccctcgcgcctgcatccgggcaagttctatgcgctgccgcaggcgccgcagcag
ttcaagcagttgatcatggtcagcggcttcgacaagtattttcagatcgcgccgtgtttc
cgcgacgaggacccgcgcgcggaccgctctcccacggatttctatcagctggacatggag
atgtccttcgtcgagcagcaggacgtgttcgacacgatccagccggtgatcaagggcctg
ttcgaggagttcggcggcggcaaggcggtggatcaggagtgggagcagatctcttaccgt
gacgcggcgctgtggtatggcaccgacaagccggacctgcgcaacccgatcaagatgcag
gatgtgagcgagcatttccgcggctcgggctttgccattttcgccaagctgctggagcag
gacggcacggaaattcgcgccattccggcacctacagggggcagccggaaattctgcgac
cggatgaatgcgttcgcgcagaaagaggggctgccggggatggggtatatcttctggcgc
gatcagggcgacgggatggaagccgccgggccgctggccaagaatatcgggccggagcgc
accgaggccattcgcgagcagcttgggctgggcgtgggcgatgcggcgttcttccttggc
ggcaagccggccgcgttcgagcgggtggcgggcaaggcgcgggtgacgatcggcgaggag
ctggggctgaccgacgagaaccggttcgcctttgcctggatcgtggatttcccgatgtac
gaggcggatgaagagtcgggcgagatcgacttttcgcacaacccgttctcgatgccgcaa
ggcgggatcgaggcgctggagggcgacccgctgaaggtgctggggtaccagtacgacctg
agctgcaacggctatgagctggtcagtggcgcgatccggaaccacaagctggaggcgatg
atcaaggcgttcgaactggcgggctatgacgaggcggaagtgcgcaagcggttcggcggc
atggtcggtgcgttccagtacggcgcgccgccgcacgggggctgtgccgcggggatcgac
cggatcgtgatgctgctggcggatgaacagaatatccgcgaggtcatcatgttcccgatg
aaccagcgggccgaggacctgatgatgaacgcgccgagcgagccggccagtgatcagttg
atggaattgggcttgcgggttttgccgcgcgaggagtga
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