Roseovarius sp. THAF27: FIU89_17160
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Entry
FIU89_17160 CDS
T06352
Symbol
potD
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein precursor
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
roh
Roseovarius sp. THAF27
Pathway
roh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU89_17160 (potD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roh02000
]
FIU89_17160 (potD)
Transporters [BR:
roh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
FIU89_17160 (potD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Motif
Other DBs
NCBI-ProteinID:
QFT82356
LinkDB
All DBs
Position
complement(3432974..3434011)
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AA seq
345 aa
AA seq
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MIERTAIRTAAVSVAALATTTVAQAEGELNLYNWGDYINPAVLTAFTEETGIEVNLDTYG
SNEEMLAKIQAGASGYDIVFPSVHMHDIMYQLGLLAKTDIGQSENFSNIDPQFIRAETDP
NAEYCLPYAWGNVGVVYNKTKVEEMSSWADLFDLAASGEKIVLLDDPRETIGIGHIMNGT
SVNSTDEAEVVAAADVIKENLENVSAFSYDSIPLVTSGDVAAAHWYVGANIFVQQNPDVL
AYYIPSEGATMYQEDMCVLKDAPNADNAKAFMEFYLRPEIAALNVEQQMNGTPNIPAQEL
IPDEIAENKSIYPDAETLEKLQIFVDLGQDLRLYNREWTAIKTAQ
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgattgaacgaacagcaattcgtaccgctgcggtgtcggttgcagcgcttgccacgacc
acagtggcccaagccgagggagagctgaatctctacaactggggagactacatcaatccg
gccgtgctcaccgcctttacggaggaaaccgggatcgaggtcaatctcgatacctacgga
agcaacgaggagatgcttgctaagatccaggcgggcgcttcgggatacgacatcgttttt
ccatcggtgcacatgcatgacattatgtatcaactgggcctgctggcgaagaccgatatt
ggacaaagcgagaatttcagcaatatcgacccgcaattcatccgtgcagagaccgatccg
aatgcggaatattgcttgccctatgcctggggcaacgtgggcgtcgtctataataagacc
aaagtcgaggagatgagcagctgggccgacctgttcgaccttgccgccagcggtgagaag
atcgtcctgctggacgatccgcgcgagaccattggcattggtcacatcatgaacggcaca
tcggtgaattccaccgacgaggccgaggtcgtggctgccgccgacgtcatcaaggagaac
ctggaaaacgtatcggccttttcctacgacagcatcccgctggtaacctcaggtgatgtc
gccgcggcgcattggtacgtaggcgccaacatcttcgtgcagcagaatccggatgtacta
gcctattatatcccgtccgagggggcgacgatgtaccaggaagacatgtgcgttctgaag
gatgcaccgaacgcagacaatgccaaggctttcatggaattctacctgcgccccgagatc
gcggcattgaatgtcgaacaacagatgaacggcacgcccaacatcccggcgcaagagttg
atccccgacgaaatagccgagaacaagtcgatctacccggacgccgaaactctggagaaa
cttcagattttcgtcgacctaggacaggacctgcggctttacaatcgcgagtggaccgcg
atcaaaaccgcccagtaa
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