Roseovarius sp. THAF27: FIU89_18410
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Entry
FIU89_18410 CDS
T06352
Symbol
rppH
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU89_18410 (rppH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
roh03019
]
FIU89_18410 (rppH)
Messenger RNA biogenesis [BR:
roh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FIU89_18410 (rppH)
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Paralog
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GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QFT82606
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All DBs
Position
complement(3679890..3680372)
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AA seq
160 aa
AA seq
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MTPEEIEKLPYRPCAGVMLVNKDGKVFVGQRIDSEYDAWQMPQGGIDEGEDPRDAALREL
WEETGVRADLVTVEAETPEWIPYDLPHELVPKLWKARYRGQMQKWFLLRFHGTDADVDIT
LPPAEFSEWKWIAPEDVVDAIVPFKRGVYAKVMEAFGDRL
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgacaccggaagagatcgagaaactgccctatcggccctgcgcgggtgtgatgctggtg
aacaaggacggcaaggttttcgtcggccagcggatcgacagcgagtatgacgcctggcag
atgccgcagggcgggatcgacgagggcgaggacccgcgcgacgcggccctgcgcgagttg
tgggaagagaccggggtgagggccgatctggtgacggtcgaggcggagacgccggagtgg
attccctacgatctgccgcatgagctggtgccgaagctgtggaaggcgcggtatcgggga
cagatgcagaagtggtttcttctgcggtttcacgggaccgatgcggatgtggacatcacc
ctgccgccggcggagttttccgagtggaagtggatcgcgcccgaggacgtggtggacgcc
atcgtgccgttcaagcgcggggtttacgccaaggtgatggaggcgttcggagacaggctg
tga
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