Roseovarius sp. THAF27: FIU89_19605
Help
Entry
FIU89_19605 CDS
T06352
Symbol
pbpF2
Name
(GenBank) Penicillin-binding protein 1F
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
roh
Roseovarius sp. THAF27
Pathway
roh00550
Peptidoglycan biosynthesis
roh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FIU89_19605 (pbpF2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
roh01003
]
FIU89_19605 (pbpF2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
roh01011
]
FIU89_19605 (pbpF2)
Enzymes [BR:
roh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
FIU89_19605 (pbpF2)
Glycosyltransferases [BR:
roh01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
FIU89_19605 (pbpF2)
Peptidoglycan biosynthesis and degradation proteins [BR:
roh01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
FIU89_19605 (pbpF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Patatin
Motif
Other DBs
NCBI-ProteinID:
QFT82837
LinkDB
All DBs
Position
3923814..3925862
Genome browser
AA seq
682 aa
AA seq
DB search
MFRFDRLLLLLALALFASGLGRDKLDQWIAATDLPPLLTPLSTEVRDRTGTLLRVYTVED
GRWRLGATPDAVDAGYLDMLIAYEDKRFYTHSGVDPRAILRATAQAIWNGEVVSGASTLT
MQVARLLEDSGTGRLSGKLRQARVALALERRLTKQQILQLYLERAPFGGNIEGVRAASYA
WFGKDPRRLTPAESALLVALPQSPESRRPDRHHFQAAEARARVLARAERDGLLTQGAVEA
ALTEPVPHTRRAFPSLAPHMADRAISDDPARLRHDLTLDAPLQAALERLATHSLRDLPPD
VSIAMMIADHKTGDILASVGSATYGIGDARSGFVDMTQAMRSPGSTLKPFIYAMGFDRGL
AHPQTLIHDRPVAFGTYAPQNFDGAFRGELTVADALRQSLNIPVVLLLDEIGPAHLLDTL
RRAGVPTELPGDQPGLAVGLGGLGITLEGLTTAYAMLANSGQTRPLNWRQDAPQHTPTNV
LNRAAAWHVADILAGLAPPPGAPKRRLAYKTGTSYGHRDAWAVGFDGRHVAAVWIGRPDG
TPVPGAFGGDLAAPVLFEAFQRLKPKADALPPPPPETLLLPTARLPQPLRRFAGRDAVFQ
PSEDAPKLIFPPAGARLPVQDGRLTVKLRDGKPPFTWLANGTPQKTGTRRREAELTGLAR
GYSKLSVIDATGRSSSVTVWID
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctttgaccgcctcctcctgctgctggccctcgcgctctttgcctccggcctc
gggcgcgacaagctcgaccagtggatcgccgcaaccgacctcccgccactcctgacgccc
ctctccaccgaggtccgcgaccgcaccggtacgctcctgcgggtctatacggtcgaggac
ggccgctggcggctcggcgccacgcccgacgcggtggatgcgggctacctcgacatgctc
atcgcctacgaggacaaacgcttctacacccattccggcgtcgatccccgcgccatcctc
cgcgcgaccgcgcaggccatctggaacggtgaggtcgtctcgggtgcctccaccctcacc
atgcaggtcgcccgcctgctcgaggacagcggcaccgggcggctttccggaaagctgcga
caggcccgcgtcgcgctcgccctcgaacgccgcctgaccaagcagcagatccttcaactc
tacctcgaacgcgcgcccttcggcggcaatatcgaaggcgtccgcgccgctagctacgcg
tggttcggcaaggacccgcgccgcctgacccccgccgagtccgcgctgctcgtcgccctg
ccgcaatcccccgaatcccgacgccccgaccggcaccacttccaggcggccgaggcccgc
gcccgcgtcctcgcccgcgcggaacgcgacggcctgctgacccaaggcgcggtcgaggcc
gccctgaccgagccggtgccccacacacgccgcgccttcccgtccctcgcgccgcacatg
gccgaccgcgcgatatccgacgaccccgcccgcctgcgccatgacctcacgctcgacgcc
cccctgcaagccgcgctggaacgcctcgccacccacagcctgcgcgatctgcccccggac
gtttccatcgccatgatgatcgccgaccacaagaccggcgacatcctcgcctccgtcggg
tccgccacctatggcatcggcgacgcccgctccggcttcgtcgacatgacacaggccatg
cgctcccccggctcgacgctgaagcccttcatctacgccatgggtttcgaccgcggcctc
gcccatccgcaaaccctcattcacgaccgccctgtcgccttcggcacctacgcgccacag
aatttcgacggcgccttccggggcgagctgaccgtggccgacgccctgcgccagtcgctc
aacatcccggtggttctgctgctggacgagatcggccccgcccacctgctcgacaccctg
cgccgcgccggcgtgccgaccgagctgcccggcgaccagcccggccttgccgtcggcctc
ggcggcctcggcatcacgctagaaggcctgacgaccgcctacgccatgctggcaaatagc
ggccagacacgtccgctgaactggcgtcaggacgccccccaacatacgccaacgaatgtt
ctgaaccgcgccgccgcctggcacgtggccgatatcctcgcgggcctcgcgccaccgccc
ggcgcacccaagcgtcgcctcgcctacaagaccggcacctcctacggccaccgcgacgcg
tgggccgtgggcttcgacggccgccatgtcgccgccgtctggatcggccgccccgacggc
acgcccgtccccggcgccttcggcggggacctcgccgcgccggtgctgttcgaggcgttc
cagcgtctgaaacccaaagccgacgccctgccgccgcctccgcccgagacgctgctcttg
cccaccgcccgcctgccgcaacccctgcgccgcttcgccgggcgcgacgcggtgttccaa
ccgtccgaggatgcgcccaagctgatcttccccccagccggcgcccgcctgcccgtccag
gacggccgcctcacggtcaaactccgcgacggcaagccgcccttcacctggctcgccaac
ggcacgccgcagaaaaccggcacccgccgtcgcgaggccgagctgaccggcctcgcccgg
ggctattccaaactgtcggtgatcgacgcaacgggccgctccagcagcgtcaccgtctgg
atcgactga
DBGET
integrated database retrieval system
