Roseovarius sp. THAF27: FIU89_19800
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Entry
FIU89_19800 CDS
T06352
Symbol
amiC4
Name
(GenBank) Aliphatic amidase expression-regulating protein
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
roh
Roseovarius sp. THAF27
Pathway
roh02010
ABC transporters
roh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FIU89_19800 (amiC4)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU89_19800 (amiC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roh02000
]
FIU89_19800 (amiC4)
Transporters [BR:
roh02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
FIU89_19800 (amiC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
QFT82876
LinkDB
All DBs
Position
complement(3963529..3964815)
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AA seq
428 aa
AA seq
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MTKLIKGTSRRGALKTLAGAAAGAASLPLWARYAQAQSSEPIKIGFQQHSTGIGAAYGRW
YGRTTEAAVKLINEGGGINGRKIEIIAEDDGTDPKRGAEVVEKFANQHGCDVGFGTLFSH
VVIGSAPRAGELKLPYFVVSEGHHVASGMLNRYTLQPGITDVKSQVQAMAPYVSENLGKK
VTMIFPDFAFGHDHRDFFTAAIEEQGGEVLEQIAIPPSETSFTKYFPQIPRDTEVLYHVM
VGPAVLTFVKELGEFFGDQGPEIFGFIDSLEAVDISSPGLEFLEGTYFWEGMPRYAQEDQ
SEHEAFYREAVGVDETGASVSDPSDVSTYAHMFGCWETLHIIKAGMEASGYAGPLDRAKL
IEAVEAMGDMPESQAHPQGAKRFNGKTHQVFGHQHISRVENGRLVRVHTTSIDDTMYPDE
VDYTTQPL
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagctgatcaagggcacgtcgcgccggggcgcgttgaaaacactggccggagca
gcggcgggcgcggcgagcctgccgctttgggcgcggtatgcgcaggcgcagagctcggag
ccgatcaagatcgggtttcagcagcacagcaccggcatcggggccgcctatggccgctgg
tacgggcgcaccaccgaggcggcggtgaagttgatcaacgagggtggcggcatcaacgga
cggaagatcgagatcatcgccgaggatgacggcacggatcccaagcgcggtgccgaggtg
gtggagaaattcgccaaccagcatggctgtgacgtcggtttcggcacgctgttttcccac
gtggtgatcgggtctgcgccgcgggcaggggagttgaagctgccctatttcgtggtctcc
gaggggcatcacgtggcgagcgggatgctgaaccgctataccctgcaaccgggcatcacg
gacgtgaagagccaggtgcaggcgatggcgccttacgtgtcggagaacctcgggaaaaag
gtcacgatgatcttccccgatttcgccttcggtcacgatcaccgggatttctttaccgcc
gcgatcgaggaacagggcggcgaggtcttggagcagatcgcgattccgcccagcgagacg
agctttaccaagtatttcccgcagatcccacgcgataccgaggtgctgtatcacgtgatg
gtcggccctgccgttctgaccttcgtgaaggaattgggcgagtttttcggcgaccagggg
ccggaaatcttcggctttatcgacagcctggaggcggtggatatttccagcccgggcctg
gagtttttggaagggacgtatttctgggaagggatgccgcgctacgcgcaggaggaccag
agcgagcacgaggcgttctatcgtgaggccgtgggcgtggacgagaccggcgcgtcggtc
agcgacccgagcgacgtgtcgacctatgcgcatatgttcggctgctgggagacgctgcac
atcatcaaggcaggaatggaagcgtcgggctatgccgggccgctggaccgcgcaaagctg
atcgaggcggtcgaggcgatgggcgatatgcccgaaagccaggcgcatccgcagggggcc
aagcggttcaatggcaagacgcaccaggtgttcgggcatcagcatatcagccgggtcgag
aacgggcgactggtgcgggtgcacacgacgtcgatcgacgacacgatgtatcccgacgag
gtggattacaccacgcagccgctgtga
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