Roseovarius sp. THAF27: FIU89_20085
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Entry
FIU89_20085 CDS
T06352
Name
(GenBank) hypothetical protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
roh
Roseovarius sp. THAF27
Pathway
roh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FIU89_20085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
roh02000
]
FIU89_20085
Transporters [BR:
roh02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FIU89_20085
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
QFT82932
LinkDB
All DBs
Position
complement(4020266..4021378)
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AA seq
370 aa
AA seq
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MKLTKTLMATTALTVAAASAHAQEMTDSMTIVSWGGAYQASQQKAYAEPYKEMNEGLEVI
WDESSNEAVAKLRAMDEAGNITWDVVDVVAADALRLCDEGLAMEIDPEEDLAAAPDGTSA
EEDFGELLVGDCFIPQIVYSTTFGYRTDMVPEGVEAPNDICDVFDLETYPGKRALEKRPI
NNVEWALLCDGVAKEEVYDVLATAEGQQQALDKLATIKDEVIWWSAGADTPQLLADGEVF
MGSTYNGRLFAAIEEQDQPIGMMWDAQVFDLDGWIIPEGLPEDRLARAKDFIMFATDTQR
LADQAKYISYGPARASSAPLVGQHAELGIDMAPHMPTDPENAQNTFLYNYEFWADYRDDI
DAKFQAWLAQ
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgacgaaaacacttatggcgacgaccgcactgacggttgctgctgcgtcggct
cacgcacaggaaatgacggattcgatgaccatcgtatcctggggcggcgcctaccaggcg
agccagcagaaagcgtatgccgagccgtacaaggaaatgaacgaaggcctggaagtgatc
tgggacgaaagctcgaacgaggccgtggccaagctgcgcgccatggacgaggccggcaac
atcacctgggatgtggtcgacgtcgtggccgctgacgcgctgcgcctgtgcgacgaaggc
ctggccatggaaatcgaccccgaggaagacctggccgccgcgcccgatggcacctcggcc
gaggaagatttcggcgagctgctggtgggtgactgcttcatcccgcagatcgtatattcg
accaccttcggctatcgcaccgacatggtgccggaaggcgtggaagcgcccaacgacatc
tgcgacgtgttcgacctggaaacctatccgggcaagcgtgcgctggaaaagcgcccgatc
aacaacgtcgaatgggcgctgctgtgtgacggcgtcgccaaggaagaagtctatgacgtc
ctggcgaccgccgaaggccagcaacaggcactggacaagctggcaaccatcaaggacgag
gtgatctggtggtccgccggtgccgacacgccgcagcttctggccgatggcgaagtgttc
atgggctcgacctacaacggtcgtctgtttgccgccatcgaagagcaggatcagccgatc
ggcatgatgtgggacgcgcaggtgttcgacctggacggctggatcatccccgagggcctg
cccgaagatcgcctggcacgcgccaaggacttcatcatgttcgcgaccgacacgcagcgt
ctggcggaccaggccaagtacatctcgtacggtccggcccgtgcctcctcggcaccgctg
gtgggtcagcacgcggaactgggcatcgacatggcgccgcacatgccgaccgacccggag
aacgcgcagaacacgttcctctacaactacgagttctgggctgactaccgcgacgacatc
gacgccaaattccaggcgtggctggcgcaataa
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