Roseovarius sp. THAF27: FIU89_20290
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Entry
FIU89_20290 CDS
T06352
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
roh
Roseovarius sp. THAF27
Brite
KEGG Orthology (KO) [BR:
roh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roh03400
]
FIU89_20290 (addA)
Enzymes [BR:
roh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FIU89_20290 (addA)
DNA repair and recombination proteins [BR:
roh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FIU89_20290 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
DEAD
Motif
Other DBs
NCBI-ProteinID:
QFT82972
UniProt:
A0A5P9H4I3
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All DBs
Position
4067118..4070480
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AA seq
1120 aa
AA seq
DB search
MVDDATQRQIDAARPGRSTWLSANAGSGKTKVLTDRVARLLLAGTDPQNILCLTYTKAAA
SEMQNRLFDRLGEWAMLPDARLEAQLTGLGIDGAITPERLREARRLFAVAIETPGGLKIQ
TIHSFCSALLRRFPLEAGVSPQFTEMEDRAAALLRAEVVETIANGPDAQLLYDVAEQYTG
EDFESLTREIVGKRDLLSRPVDDARLSALFGLKPDDTAQTLVASVFPGGEADLMATLLPL
LTAGSKTEATAAVKLTMADIPSLQALPILEDVFLTGSSAKSPFSAKIGSFPTKALRESNP
GLTEKLNAFMARVEAARETRLALDARAMTRVLHRFAAVFLPAYAAAKEARGMLDFDDLIL
RSRDLLDDPKVADWVLFKLDGGIDHILVDEAQDTSPVQWTLIERLSQEFTSGTGARADRE
RTIFVVGDKKQSIYSFQGADPEGFDRMKEDFRAKLDVTDAPLQDMEMEFSFRSAQTILSL
VDETFSGLEASGFTQREPHKAFHAGMPGRVDLWPPVEKEEAEDPPEWYDPVDIMTPGDPA
TRLAAQTARNVKAMLGTPLPSKDGTSARAITEGDILILVQRRSDLFHEIIRACKSQGLNV
AGADRLRVGAELAVRDIAALLSFLATPEDSLSLATALRSPLFGWSEGQIFDLAHYRQQRY
LWQALRDRAAEFPETFAILDDLRDASDYLRPYDMIERILTRHDGRARLLARLGSEAEDGI
DALLSQAMAYEQNAVDSLTGFLVWMETDDLEIKRQLDGAGDRIRVMTAHAAKGLESPIVI
LPDSAKRDLRVEARLIAAGDTALWRPRKDDLPTALQPLDAAERDAQWAERDRLLYVAMTR
AEQWLIVAAAGDLDREGRDWYSKVRGGMLRSNAVEHVFDAGQGLRLQGGNWAGLEPESAQ
KAEAETVTLPAFFADPARPAPAAPETLAPSTDLGGDKALPGEAGLDEDAAKRRGRQVHRL
LEVLPQLAPDDWADRAASVLAHGPDAAQGQDLTLLLAEAQAVLTQDNLHMLFTPEALAEV
PVSAHIDSLGGWRIHGTIDRLIVTPEKILAVDFKTNAVVPATPADVPSGLLRQMGAYAHA
LQQIYPDRAIETALLWTRTATLMPLPHDLVTQALADTHIA
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggtagacgacgccacccagcgccagatcgacgccgcgcggcccgggcgctcgacatgg
ctgtcggccaatgccggatcgggcaagaccaaggtgctgactgaccgggtcgcgcggctg
cttttggctggaacagacccgcaaaatatcctgtgcctgacctacaccaaggccgccgca
tccgagatgcagaaccgcctgttcgaccggctgggcgagtgggcgatgctgcccgacgcc
aggctggaagcgcagttgacgggcctaggcatcgacggcgcgatcacgcccgagcgcctg
cgcgaggcgcgccgcctgttcgcagtcgccatcgagacgcccggcgggctcaagatccag
accatccactcgttctgttcggccctcttgcgccgttttccgctcgaggccggcgtcagc
ccgcaatttaccgagatggaggaccgcgccgccgccctgctgcgggccgaggtggtcgag
acaatcgccaacgggcccgacgcgcagctgctctacgatgtggccgaacaatataccggc
gaggatttcgagagcctgacccgggaaatcgtcggcaagcgggacctcctgtcacggcct
gtcgacgatgcacggctttccgccctgttcgggctgaaaccggatgacaccgcgcagacg
ctcgtcgcgtccgtctttccgggtggcgaggccgacctgatggccaccctgctccccttg
ctgaccgcgggcagcaagacggaggccaccgcagcggtcaagctgaccatggccgacatc
ccgtcgctccaggcgctgccgatcctcgaggatgtcttcctcaccggcagcagtgcaaaa
tcgccgttttccgccaagataggctctttcccgaccaaggccctgcgcgaaagcaacccc
ggtctgacagagaaactcaacgccttcatggcccgcgtcgaggcagcgcgcgagacccgc
ctcgccctcgacgcccgggccatgacgcgtgtcctgcatcgcttcgccgccgttttcctg
cccgcctatgccgccgccaaggaagcgcgcgggatgctggatttcgacgacctcatcctg
cgcagccgcgacctgctggacgatcccaaggtcgccgactgggtgctgttcaagctcgac
ggcggcatcgaccacatcctcgtcgacgaggcgcaggacaccagcccggtccaatggacc
ctgatcgagcggctgtcgcaggaattcaccagcggcaccggcgcccgcgccgatcgggag
cggacgatcttcgtcgtcggcgacaagaagcagtcgatctattccttccagggcgccgat
cccgaagggttcgaccgcatgaaggaggatttccgcgccaagctggacgtcaccgacgcg
cccttgcaggacatggagatggagttttccttccgctcggcgcagaccattctgtcgctg
gtggatgaaacctttagcgggctggaggccagcggttttacccagcgcgaaccgcacaag
gcgttccacgccggcatgccgggccgcgtcgatctgtggccgccggtcgaaaaggaagag
gccgaagacccgcccgagtggtacgaccccgtcgacatcatgacgcccggcgatccggca
acgcggctggccgcgcaaacggcccggaacgtaaaggcgatgctgggcacgcccctgccg
tcgaaggacggtacatcggcgcgcgcgatcaccgagggcgacatcctcatcctcgtgcag
cgccgctccgacctctttcacgagatcatccgcgcctgcaaatcccagggcctgaacgtc
gccggggccgaccgcctgcgcgtcggcgcggaactcgccgtgcgggacatcgccgccctc
ctgtccttcctcgccacgcccgaggacagcctgtcgctcgccaccgccctgcggtcgccg
cttttcggctggagcgagggacagatcttcgatctcgcgcattaccgccagcaacgctat
ctctggcaggcgctgcgcgaccgcgcggcggagtttcccgaaaccttcgccattctcgac
gatctgcgcgacgcctccgactacctgcgcccctatgacatgatcgagcgtattctcacg
cgccacgacgggcgcgcgcggctgctggcgcggctggggtccgaggcggaagacggcatc
gacgcgctcttgtcccaggccatggcctacgagcagaacgcggtcgacagcctgacgggc
tttctggtctggatggaaaccgacgatttggagatcaagcgccagctggacggcgcgggc
gaccggatccgcgtgatgaccgcccacgccgccaaggggctcgagtcgcccatcgtcatc
ctgcccgacagcgccaagcgcgacctgcgggtcgaggccaggctgatcgcggcgggcgac
accgctctgtggcggccccgcaaggacgatctgcccacggcacttcagcccctggacgcg
gccgagcgggacgcgcaatgggccgagcgtgaccggctgctttacgtcgccatgacccgg
gccgagcaatggctgatcgtggccgccgcgggcgatctcgatcgcgaaggtcgcgactgg
tacagcaaggtgcgcggcggaatgctgcggtcgaacgctgtcgagcatgtcttcgacgcg
gggcaggggctgcgcctgcagggcggaaactgggccgggctagagcctgaatccgcccaa
aaggccgaggccgaaaccgtcacgcttcccgcctttttcgccgaccccgccaggcccgcg
ccggccgcgcccgaaacccttgccccctccaccgaccttggcggcgacaaggcgctgccg
ggcgaggcggggctggacgaagacgccgccaagcgccgcggccgccaggtgcaccgcctg
ctggaagttctgccgcaactggccccggacgactgggccgacagggccgcctccgtcctg
gcccacggtcccgacgccgcgcaggggcaggatctgaccctcttgctggccgaggcacaa
gccgtgctgacgcaagataacctgcacatgctctttacccccgaggcactggccgaggtc
ccggtttccgcccatatcgactcgctgggtggctggcggattcacggcacgatcgaccgc
ctgatcgtgacgcctgagaaaatccttgccgtcgatttcaagaccaacgccgtcgtcccc
gccacgccggccgatgtgccctctggcctcttgcggcagatgggcgcctatgcccatgcc
ctgcaacagatttatcccgaccgcgccatcgagaccgcgctgctctggacccgcaccgcc
acgctcatgcccctgccacacgatcttgtgacacaggcgctggccgacacccatatagct
tga
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