Roseateles amylovorans: N4261_00460
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Entry
N4261_00460 CDS
T08701
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
roi
Roseateles amylovorans
Pathway
roi03030
DNA replication
roi03430
Mismatch repair
roi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N4261_00460
03430 Mismatch repair
N4261_00460
03440 Homologous recombination
N4261_00460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roi03032
]
N4261_00460
03400 DNA repair and recombination proteins [BR:
roi03400
]
N4261_00460
Enzymes [BR:
roi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N4261_00460
DNA replication proteins [BR:
roi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N4261_00460
DNA repair and recombination proteins [BR:
roi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N4261_00460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
UXH78450
UniProt:
A0ABY6B0T2
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All DBs
Position
107227..107910
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AA seq
227 aa
AA seq
DB search
MKRTIAVIDFETTGHSPQGGGRATEIAAVLLRDGQIVGQYQSLMRSGAWVPPMIERLTGI
SNEMLEDAPDAARVMREVAEFTAGCGFVAHNAAFDRGFWIAELARVEEGDGTMTRHSRFA
PEFACTVKLARRLYPESPNCKLGTLARYHQLPDNGRAHRALADALTTAQLVQRMQRDIGL
ELADPLAELSVEHELLLRLQAVAKPLWQKAATGYARDMRRHLQESLV
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcaccatcgccgtcatcgacttcgaaaccaccgggcactcgccacagggcggc
ggccgggcgacggaaatcgctgctgtgctgctgcgtgacggtcagatcgtcgggcagtat
cagagcctgatgcgcagcggcgcctgggtgccgccgatgatcgagcggctgaccggcatc
agcaacgagatgctggaggacgcaccagatgcggcgcgcgtcatgcgcgaagtggccgag
ttcaccgccggctgcggctttgtggcgcacaacgcggccttcgatcgcggcttctggatc
gccgagctggcacgggtggaggagggcgacgggacgatgacgcgtcacagccgtttcgcg
ccggaattcgcatgtacggtcaagttggcccgtcgtctttaccctgaatcccccaattgc
aaactcggcacactggcgcgatatcaccaactgcccgacaatggtcgggcccaccgtgcg
ctcgccgatgcgctgacaaccgctcaactggtccagcgcatgcaacgcgacatcggcctt
gaactggccgatccgttggcggaactgagcgtcgaacatgaactgctgctgcgtctgcag
gcggtggccaaacccttgtggcagaaggcggcgacgggctacgcccgagatatgcgtcgt
catctgcaggaatcactcgtctga
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