Roseateles amylovorans: N4261_04470
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Entry
N4261_04470 CDS
T08701
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
roi
Roseateles amylovorans
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roi03000
]
N4261_04470 (rtcR)
Transcription factors [BR:
roi03000
]
Prokaryotic type
Other transcription factors
Others
N4261_04470 (rtcR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_22
AAA_16
NACHT
AAA_30
AAA_19
AAA_7
BrxC_BrxD
DUF6213
T2SSE
AAA_14
ATPase_2
MCM
AAA_2
Motif
Other DBs
NCBI-ProteinID:
UXH79198
LinkDB
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Position
1029656..1031290
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AA seq
544 aa
AA seq
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MAKKNVVIGFLGTQLDGGKGAGRWEKWRPTVSLVQHHDAVVDRLELMFTARHLELARLVQ
RDIAQVSPETEVRLVELQIDDPWDFGEVYTTLYDWSQTYPFDPAREDYRAHITTGTHVAQ
ICMFLMIEARFIPGVLLQTSPPRRQTAGDPGTMTLIDLDLSRYDPIARRFQAAQQDAVAF
LKRGIATRNRRFNALIEEVERVAVRSRAPMLLAGPTGAGKSFLARRMYELKQSRHQLDGL
FVDVNCATLRGDGAASTLFGHKKGAFTGAAADRPGLLRTAHKGLLFLDEIGELGLDEQAM
LLKAIEEKRFLPVGADREVESDFQLIAGTNRDLRAEVAAGRFRDDLFARINLWTYSLPGL
RDRPEDIEPNVEHLLAQAAQDSGRAVRFSAEAKTRYLAFAQSARAPWSGNFRDLSASITR
LATLAEGGRISLPLVEAEIARLAWLWDRGDATLPTTGASSRGPAAAPDLTALLGEEAVEA
MDLFDQLQLAAVVRVCRGARTLSDAGRQLFQASREARSVINDADRLRKYLLKFGLNWEQV
IAET
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaagaatgtggtgatcggcttcctgggcacccagctggacggcgggaagggc
gccggccggtgggagaaatggcggccgaccgtgtcgctggttcagcatcacgatgcggtg
gtggaccggctggagctgatgttcaccgcgcgccacctggagctggcgcggctggtgcag
cgcgacattgcgcaggtctcacccgagaccgaggtgcggctggtggagctgcagatcgat
gatccgtgggacttcggcgaggtctacaccacgttgtacgactggtcgcagacctatcca
ttcgaccccgcccgtgaggactaccgcgcccacatcaccaccggcacccacgtcgcccag
atctgcatgttcctgatgatcgaggcgcggttcatccccggggtgctgctgcagacctcg
ccgccccggcgccagacggccggcgaccccggcacgatgacgctgatcgacctggacctg
tcgcgctacgacccgatcgcgcgccgcttccaggcggcgcagcaggatgcggtggccttc
ctcaagcgcggcatcgccacccgcaaccggcggttcaatgcgctgatcgaggaagtggag
cgggtcgcggtgcggtcacgcgcgccgatgctgctggcggggccgaccggtgcggggaag
tcgttcctggcgcgtcggatgtatgaactcaagcagtcgcggcaccaattggacgggctg
tttgtcgacgtcaattgcgccacgctgcgcggtgacggcgcggcgtccaccttgttcggc
cacaagaagggcgcgttcaccggcgctgcggcggatcgacccggcctgctgcgcaccgcg
cacaaggggctgctgttcctcgatgagatcggcgaactgggcctggatgaacaggccatg
ctgctgaaggcgatcgaggagaagcgcttccttccggtgggcgcggaccgcgaggtcgag
agcgacttccagctgattgccggcaccaaccgggacctgcgcgccgaagtggcggcgggc
cgattccgcgacgacctgttcgcacggatcaacctgtggacctacagcctgcccggcctg
cgcgaccggccggaggacatcgagcccaatgtggagcatctgctcgcccaggccgcgcag
gacagtggtcgcgcggtgcgcttcagcgccgaggccaagacgcgctacctggcttttgcg
cagtcggcgcgggcgccttggagcggcaacttccgcgacctgagcgcgtccatcacccga
ttggcgacattggccgaaggcgggcgcatcagcctgccgttggtggaggccgagatcgcc
cgcctggcgtggttatgggatcgcggggatgccaccttgccgaccacgggcgcgtcatct
cgcggtcccgctgccgcgcctgacctcaccgccctgctgggcgaggaggctgtcgaggca
atggatctgttcgatcagcttcaactcgcggccgtggtgcgggtgtgtcgcggcgcgcgc
acgctgtccgacgctggacggcaactgttccaggccagccgggaagcgcgcagcgtcatc
aatgatgcggaccgactccgcaagtacctgctgaagttcggactgaattgggagcaggtc
atcgcggagacctga
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