Roseateles amylovorans: N4261_07040
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Entry
N4261_07040 CDS
T08701
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
roi
Roseateles amylovorans
Pathway
roi03410
Base excision repair
roi03430
Mismatch repair
roi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N4261_07040 (recJ)
03430 Mismatch repair
N4261_07040 (recJ)
03440 Homologous recombination
N4261_07040 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roi03400
]
N4261_07040 (recJ)
DNA repair and recombination proteins [BR:
roi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
N4261_07040 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
N4261_07040 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
N4261_07040 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
PIGA
Cwf_Cwc_15
Motif
Other DBs
NCBI-ProteinID:
UXH79661
UniProt:
A0ABY6B4K0
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Position
complement(1622820..1624559)
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AA seq
579 aa
AA seq
DB search
MNAPRLLVRDVPPDSAFALEQAGVSPLLARLFAARGVSSAVDLAPSFKHLLRPTDLKDID
RAANLLADSLQAGERLCIVADYDCDGATACAVMLRGLAMLGARAGTLSYVVPDRAVHGYG
LTPTIVELALQHRPQVLVTVDNGIASHAGVSHARALGLKVLVTDHHLPAADAQGQPTVPD
ADALVNPNQPGCGFESKSLAGVGVAFYVLWALRDELIRRDPSAKDRLPSLLGVMDLVALG
TVADVVKLDANNRRLVAQGLQRMREGRMQPGVAALFTAAGRDASRANSFDLGFALGPRIN
AAGRLADMTMGIGCLTCDDSDQALELARELDRINRERREIEAGMQEQALVLLDRLMADPR
LNGAPPPALAIFDEDFHEGVVGIVASRIKDRLHRPVFVFAKGADGQLKGSGRSIAGFHLR
DALDLISKRHPDLLRKFGGHAMAAGCTLAPGGVAAFGAAFEQIAREWLDDGALTRTLRTD
GPLPPEAFCPETVQELEAQVWGQAFEAPLFCDRVQVINQRLVGERHLKLRLRQGALLRDA
IWFGHTEPLPEQVTLAYRLSLDEYQGQKRVQMVVEAMAE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcgccgcgcctgctggtccgcgatgtgccgccggacagcgcctttgcgctggag
caggccggcgtctcgcccttgctcgcccggctgttcgccgctcgcggtgtcagttccgcc
gtggacctggcgcccagcttcaagcatctgctgcgccccaccgacctgaaggacattgac
cgcgccgccaacctgctggccgacagcctgcaggccggcgagcgcctgtgcatcgtggcc
gactacgactgcgacggcgccaccgcctgcgcggtcatgctgcgcggcctggcgatgctc
ggcgcccgcgcgggcacgctcagctatgtggtgcccgaccgggcggtgcacggctacggc
ctgacgcccaccatcgtcgagctggcgcttcagcatcggccgcaggtgctggtcaccgtg
gacaacggcatcgccagccatgcgggcgtgtcccatgcccgcgcactcgggctgaaggtg
ctggtcaccgatcaccacctgcccgccgccgatgcccagggccagcccaccgtgcccgac
gccgatgcgctggtgaatcccaaccagcccggctgcggcttcgagagcaagagcctggcc
ggcgtcggcgtggccttctacgtgttgtgggcgctgcgggatgagctgatccgtcgcgat
ccgtccgccaaggaccggctgcccagcctgctcggcgtgatggatctggtcgcgctgggc
acggtggccgacgtggtgaagctggacgccaacaaccggcggctggtggcgcaaggcctg
caacggatgcgcgaaggccgcatgcagcccggcgtggccgcgctgttcaccgccgccggg
cgggatgcctcacgcgcgaacagcttcgatctgggcttcgcactcgggccacgcatcaat
gcggccgggcggctggccgacatgaccatgggcatcggctgcctgacctgcgacgactcc
gatcaggcgctggaactcgcccgcgagctggaccgcatcaaccgcgaacgccgcgagatc
gaggccgggatgcaggagcaggccttggtcctgcttgaccgcctgatggccgatccccga
ctcaacggcgcaccgccgcccgcgttggcgatcttcgatgaagacttccatgagggcgtg
gtcggcatcgtggcctctcgcatcaaggatcggctgcatcggccggtgtttgtcttcgcc
aaaggggcggacggccagttgaaaggctccgggcgatcgatcgccggcttccacctgcgg
gatgcgctggacctgatctccaaacgccatcccgatctgctgcgcaagttcggtggccat
gccatggccgccggttgcaccctcgcgcccggcggggtggcggccttcggtgccgccttc
gagcagatcgcccgcgaatggctggacgacggcgccctcacccgcaccctgcgcaccgac
gggccgctgccgcccgaagccttctgcccggaaaccgtgcaggagctcgaggcccaggtc
tggggccaggccttcgaggcgccgctgttctgcgaccgggtccaggtgatcaaccagcgc
ctggtcggcgagcgccatctcaagctgcgcctgcggcaaggcgcgctgctgcgggatgcc
atctggtttggccacaccgaaccgctgcccgagcaggtcaccctggcctatcggctcagc
ctggatgagtaccaggggcagaaacgggtgcagatggtggtggaagcgatggcggagtga
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