Roseateles amylovorans: N4261_09860
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Entry
N4261_09860 CDS
T08701
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
roi
Roseateles amylovorans
Pathway
roi00300
Lysine biosynthesis
roi00470
D-Amino acid metabolism
roi01100
Metabolic pathways
roi01110
Biosynthesis of secondary metabolites
roi01120
Microbial metabolism in diverse environments
roi01230
Biosynthesis of amino acids
Module
roi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N4261_09860
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N4261_09860
Enzymes [BR:
roi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
N4261_09860
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UXH80851
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All DBs
Position
2296641..2297846
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AA seq
401 aa
AA seq
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MDQFAVADGELLIGGQRLSRLADRIGRTPFYACDRSLLTHRVHALRAALPVGIELHYAMK
ANPMPAVVAHMAGLVDGIDVASGGELQVALDAGADPREISFAGPGKSALELKQALAAGIL
INIESFREVELLRQLSAETGYAARVAVRVNPDFELKSSGMKMGGGPKQFGVDAEQVPDLL
ARIGEAGLGFEGFHLFAGSQNLKPEAIVEAQQKSFELALRLAKDAPAPVRVLNLGGGFGI
PYFPGEQRLDLAPIGANLAALLQRSQVEMPGVRLVIELGRYLVGEAGVYVCRVVDRKVSR
GQVYLVTDGGLHHHLAASGNFGQVIRKNYPVAIGNRMDGAMEPGVSVVGPLCTPLDLLGE
RMSLAHAEPGDLVVVFQSGAYGITASPQNFLSHPAAAEVLV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtttgccgttgccgatggcgagctgctgatcggcggccagcgcctgtcccgc
ctggcggaccgcatcggccgcacgccgttctatgcctgcgatcgcagcctgttgacacac
cgcgtccatgccttgcgggcggcactgcccgtcggcatcgaactgcattacgcgatgaag
gccaacccgatgccggcggtggtcgctcacatggccggtctggtggatggcatcgatgtg
gcctccggcggcgaactgcaggtggcgctggacgctggcgcagatccgcgcgagatcagc
tttgccggccccggcaagagcgctctcgagctcaaacaggccttggcggccggcatcctg
atcaacatcgagtccttccgcgaggtcgagctgctgcgtcagctgtcagcggagaccggc
tatgcggcacgcgtcgcggtgcgggtgaatccggacttcgagctgaagtcctccggcatg
aagatgggcggcggcccgaagcagttcggcgttgatgccgagcaggtgccggacctgctg
gctcgcatcggtgaggcggggctgggcttcgaaggcttccatctcttcgccggctcgcag
aacctcaagccggaagcgatcgtcgaggcccagcagaagagcttcgaactggcgctgcgt
ctggccaaggacgcgcccgcgccggtgcgggtgctcaacttgggcggcggcttcggcatc
ccgtatttcccgggcgagcagcggctggatctggcgccgattggtgccaacctcgccgcg
ttgctgcagcggtcccaggtcgagatgcccggcgtgcggctggtcatcgaactgggccgc
tacctggtgggcgaggccggtgtctatgtgtgccgcgtggtggaccgcaaggtttcgcgc
gggcaggtctatctggtgacggatggtggcctgcatcaccatctggcggcctccggcaac
ttcggtcaggtgatccgcaagaactacccggtcgcgatcggcaaccgcatggacggcgcg
atggagcccggcgtgtcggtggtggggcccttgtgcacgccgctggacctgctgggcgag
cgcatgagcctggcccatgcggagcccggcgatctggtggtggtgttccagtcgggcgcg
tacggcatcacggccagtccgcagaacttcctgagccatcctgcggcggccgaggtgctg
gtgtga
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