Roseateles amylovorans: N4261_10580
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Entry
N4261_10580 CDS
T08701
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
roi
Roseateles amylovorans
Pathway
roi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
N4261_10580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
roi03000
]
N4261_10580
03400 DNA repair and recombination proteins [BR:
roi03400
]
N4261_10580
Enzymes [BR:
roi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
N4261_10580
Transcription factors [BR:
roi03000
]
Prokaryotic type
Helix-turn-helix
AraC family
N4261_10580
DNA repair and recombination proteins [BR:
roi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
N4261_10580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HhH-GPD
HTH_AraC
HHH
HTH_23
Motif
Other DBs
NCBI-ProteinID:
UXH80283
LinkDB
All DBs
Position
complement(2485978..2487702)
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AA seq
574 aa
AA seq
DB search
MDLSLDPDHCYPALLARDARFDGQWFVGVKTTGIYCRPICRVRPPKRENCEFYASASLAE
AARYRPCLKCRPELAPAARRWSAMDAGEVLAREAARWLDECAPETASLPVLAAHLGVSER
HVRRVFTAVHGVAPLQYLQTRRLLLAKQLLTDTRLPVSEVALAAGFSSLRRFNAAFATQY
RLSPTALRRTGGDPTDTATETAELRLDLRPPLLGTVLLQFLAARAVPGVEQVDIERLTLS
RSVRLARPGQDDLLGWLTVRLSADGAERAQVQVRLSASLWPAMAALMPRLRRWLDLDADP
HAIAAALGDSLGSSAEGLRLPGTLDRFELAIRAVLGQQVTVAAARTLATRLIARFGEPLP
VALGAPEGITHAFPPPARLAAASVDDIASLGMPARRAQALITLAQQWPTLGFAQGRGSVQ
AAIAELVALPGIGPWTAHYMLMRGWSWPDAFLPGDVVLKQRLEHRAGRPLTPLALITAAE
AFAPYRSYAVLQWWREASAAAPVKRTARPIAAAIAAVAALAEGAATSKLRSDSDLRSGPT
SGLTSGLTSGRTSDLPTPVAAPRCRRPARKEPSP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggacctctccctcgaccccgaccactgctaccccgccctgctggcgcgggatgcccgc
ttcgacggccaatggttcgtgggcgtgaagacgaccggcatctactgccgcccgatctgc
cgggtgcggccgcccaagcgcgaaaactgcgagttctatgccagcgccagcctggcggaa
gccgcccgctaccgcccctgcctgaaatgtcgccccgagttggcgccagccgcacgtcgg
tggagcgcgatggatgcgggcgaggtgctggcccgcgaagccgcccgctggctcgacgaa
tgcgccccggaaaccgcctcgctcccggtgttggccgcccacctgggcgtgagcgagcgg
catgtgcgccgggtgttcaccgccgtccatggcgtggccccgctgcagtatctgcagacc
cggcgcctgttgctggccaagcagttgctgacggatacacgtctgccggtctcggaggtc
gccctggcggccggtttctccagcctgcgtcgcttcaatgcggcctttgccacgcagtac
cgcctgagcccgaccgccctgcgccgcaccggaggcgatccgacggacaccgccaccgag
acggcggagctgcgcctggaccttcgcccgccgctcctgggcacggtgctgctgcagttc
ctggcggcccgggcggtgcccggcgtcgagcaggtcgacatcgagcggctgacgctgtcc
cgcagtgtgcgactggcccggcccggccaggacgacctgctcggctggctcaccgtgcgc
ttgagcgccgacggtgccgagcgtgcccaggtgcaggtgcgcttgagcgcctccttgtgg
ccggcgatggccgcgttgatgcctcgtttgcggcgctggctggacctcgatgccgatccc
cacgccatcgcggcggccttgggcgattcgctcggatcgtccgctgagggactgcggctg
cctggcacgctggaccggttcgaactggcgatccgtgcggtgctgggtcaacaggtcacc
gtggccgctgcacggacgctggctacccgtctgattgcccggttcggcgagccgctgccg
gtggcgctcggcgcgccggaaggcatcacccatgcattcccgccgcccgcgcgtctggcg
gcggccagtgtggacgacatcgcctcgctcggcatgccggcacgtcgcgcacaggccctg
atcaccctggcgcagcagtggcccaccttgggctttgcgcagggccgtggcagcgtgcag
gcggcgattgccgagttggtcgcgctgcctgggatcggcccctggaccgcccactacatg
ctgatgcggggctggagctggccggatgccttcctgccgggcgacgtcgtgctcaagcag
cgactggaacatcgcgccggacgcccactgacgccgctggccctgatcacggccgccgag
gcctttgccccctaccgcagctatgcggtgctgcagtggtggcgggaagcctccgctgct
gcaccggtgaagcgcacggcccggccaatcgctgcggcgatcgccgcggtggcggcgctc
gccgagggggcggcgacgtccaagctcaggtccgattccgatctcaggtccggtccgacc
tccggtctcacgtccggtctcacgtccggtcgcacctccgatctccccactcccgtcgcc
gctccgcgctgccgtcgacccgccaggaaggaaccgtcgccatga
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