Roseateles amylovorans: N4261_11380
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Entry
N4261_11380 CDS
T08701
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
roi
Roseateles amylovorans
Pathway
roi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N4261_11380 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
roi03019
]
N4261_11380 (pcnB)
Enzymes [BR:
roi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
N4261_11380 (pcnB)
Messenger RNA biogenesis [BR:
roi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
N4261_11380 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
DUF2204
Motif
Other DBs
NCBI-ProteinID:
UXH80431
UniProt:
A0ABY6B4Y5
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All DBs
Position
2685181..2686863
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AA seq
560 aa
AA seq
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MIKKLINKLLRKAEGGVILTPLGKRMEVLAEEHRIDPELLDERGVKVVKGLTDAGFEAYI
VGGAVRDLLLGRRPKDFDVATDATPEQVKNQFRRAFIIGRRFRIVHVVFGRGREHEVIEV
STFRALLTQDDAEQVQGNEKTSKDALAGKSHVVDASGRVLRDNVWGPQIEDAARRDFTVN
AMYYDPQRELVVDYHGGLADVRKKVLRMIGDPETRYREDPVRILRAVRFAAKLGFTIEPK
TRAPIPAMSALLANVPLSRMFDEMIKMLQTGHALASLDELRKQGLARGIFPILDAVLDKD
GALPENVHGKFVRLALEDTDKRVTEGRSVAPSFMLACMLWGEVQQRWKRLTDKGEGAVAA
LQQAIDLVFDARVGDISGRGKLAADMREIWMMQPRFERRTGSGPHRLIEQPRYRAGFDFL
ALRAEAGEIDPALADWWEDFALGDEDERRALLEQVRETQRQGTPRSRPKAGGGRVHQVAR
GAVGTSVSGESAAAVPLGDVDLDLSDADDEGEGDDGDGAGSEGAKAASPARKRRRRRKPK
AAGGAEGAAATSSSGSDGDA
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaaactgatcaacaagctgttgcgcaaggcggagggcggcgtgatcctcacg
ccgctgggcaagcggatggaagtcctcgccgaggaacaccgcattgacccggagctgctc
gatgagcgcggcgtcaaggtggtcaagggcctgactgatgccggcttcgaggcctacatt
gtcggcggcgccgtgcgcgacctgctgctgggccgtcgccccaaggatttcgacgtggcc
accgatgccacgccggagcaggtgaagaaccagttccgccgcgctttcatcatcggccgc
cgtttccggatcgttcacgtggtgttcggccggggacgcgagcatgaagtgatcgaggtg
tccactttccgtgcactgctcacgcaagatgatgccgagcaggtacagggcaacgagaag
acgtccaaggacgcattggccggcaagtcgcatgtggtggatgccagcggccgcgtgctg
cgcgacaacgtctggggcccgcagatcgaagatgcggcccgccgcgacttcaccgtcaac
gccatgtattacgacccgcagcgcgagctggtggtcgactaccacggcggcttggctgac
gtccgcaaaaaggtgcttcggatgatcggcgacccggaaacccgctaccgcgaggatccg
gtccgcatcctgcgtgcggtgcgttttgccgccaagcttggcttcaccatcgaacccaag
acccgcgcgccgatcccggcgatgtcggctttgctggcgaatgtgccgctctcgcgcatg
ttcgacgagatgatcaagatgctgcagaccggccatgcgctggccagcctggacgaactg
cgcaagcagggtctggcccgcggcatcttcccgatcctggatgcggtgctggacaaggac
ggcgcactgccggagaacgtgcacggcaagttcgtccgcctggcgctggaagacaccgac
aagcgggtgaccgaaggccgttcggtcgcgccgagcttcatgctggcctgcatgctgtgg
ggtgaggtccagcagcgctggaagcgtctgaccgacaagggcgaaggcgccgtggcggcc
ttgcagcaggcgatcgacctggtgttcgatgcccgggtcggcgacatctccggccgcggc
aagctggcggcggacatgcgcgagatctggatgatgcagccgcgcttcgagcgccgcacc
ggcagcggtcctcatcgcctgatcgaacagccgcgctaccgcgccggcttcgacttcctc
gcgctgcgcgccgaggcgggcgaaatcgatcccgcgctggccgactggtgggaagacttc
gcgctgggcgatgaagacgagcgtcgcgcgctgctggagcaagtccgtgagacccagcgc
cagggcacgccgcgcagccgtccgaaggcgggcggcggtcgggtgcatcaggtggcacgc
ggcgcggtcggcacttctgtcagcggtgaatcagcggctgcggtgccgctgggcgacgtg
gacctggatctgagcgacgccgatgacgagggcgagggcgacgacggtgacggcgccggc
agcgaaggcgccaaagccgccagcccggcccgcaagcgccggcgtcggcgcaagcccaag
gcggcgggtggggcggaaggcgccgccgcaacatcctcctcgggttccgacggcgacgca
tga
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