Roseateles amylovorans: N4261_11925
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Entry
N4261_11925 CDS
T08701
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
roi
Roseateles amylovorans
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roi03032
]
N4261_11925
03400 DNA repair and recombination proteins [BR:
roi03400
]
N4261_11925
Enzymes [BR:
roi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
N4261_11925
DNA replication proteins [BR:
roi03032
]
Prokaryotic type
DNA Topoisomerases
N4261_11925
DNA repair and recombination proteins [BR:
roi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
N4261_11925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UXH80529
LinkDB
All DBs
Position
2814232..2815455
Genome browser
AA seq
407 aa
AA seq
DB search
MSLRWVSDCEPGLRRQRAGKGFRYIDASGRSVRDPEVLRRIRALAIPPAYEQVWICARED
GHIQATARDAKGRKQYRYHADWMALRGDNKFGSLTDFAAGLPRLRRQVQRRLGDRGLGRD
RVIAALVRLLDRTWMRIGHREYARTNGSYGLSTLLCRHVKVSGDALLLSFVGKSGVRHQL
AVKDERVAALVRHCRDLPGQELFGYEDEQGEPHRIDASDVNDWLARVGSPTCSAKVFRTW
HASVLALDLLQAQARAGRAPAAALKDVLTQVAGRLGNTVAVCRKSYVHPAVIDWASADQF
DQLPVQPWMREPPSVAGLSVPERRLIGLLRATASAQVGAAASAAVVTVTASPAPSPSHAK
RDTRRRSAAGRDAAQRGRASGARAPNQPTTAVKAPKGSTKQTAMAAT
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcgatgggtgtccgactgcgagcccggcttgcgccgccagcgcgccggcaag
ggatttcgctatatcgatgcgtcaggtcgctcggtgcgcgacccggaggtgcttcgccgc
atccgcgcgctggccattccgccggcgtatgagcaggtctggatctgtgcgcgcgaggac
ggtcatatccaggccaccgcgcgtgatgcgaagggccgcaagcagtaccgctaccacgcc
gactggatggccctgcgcggtgacaacaagttcggctcgctgaccgacttcgccgccggc
ctgccgcgcctgcgtcgtcaggtgcagcggcgcctgggcgatcgcggcctgggtcgagac
cgggtgattgccgcattggtgcggctgctggaccgcacctggatgcgcatcggccaccgg
gaatatgcccgcaccaatgggtcctacggcctgagcacgctgctgtgccggcatgtgaag
gtcagcggcgatgcgctgctgctgagcttcgtcggcaagagtggggtccgccatcaactg
gcggtgaaggatgagcgggtggccgccttggtccgccattgccgcgacctgccgggtcag
gagctcttcggctatgaagatgagcagggcgaaccgcaccgcatcgatgcgtccgatgtg
aatgactggttggcgcgggtcggcagtccgacctgcagcgccaaggtgtttcgcacctgg
catgccagtgtgttggcgctggatctgttgcaggcgcaggcgcgtgcaggtcgggcgcct
gcggccgcactgaaggacgtgctgacccaggtggccgggcgtttgggcaacaccgtggcg
gtgtgccgcaagtcgtatgtgcatccggccgtcatcgactgggccagcgccgatcagttc
gatcagttgcccgttcaaccgtggatgcgcgaaccgccgtcggtggccggtttgagcgta
cctgagcgtcggctgatcggtttgctgcgtgcgacggcttcggcgcaggtcggcgcggca
gcctctgcggccgtggtcacggtgacggcctcacccgctccgtcgcccagtcatgccaaa
cgcgacacccggcgccgttcagcggcgggtcgcgatgccgcccagcggggtcgggcatcc
ggggcgagggcgcccaatcagccgacgaccgccgtcaaagcgccgaagggatcgacgaag
caaacagcgatggccgcaacctga
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