Roseateles amylovorans: N4261_16060
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Entry
N4261_16060 CDS
T08701
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
roi
Roseateles amylovorans
Pathway
roi03420
Nucleotide excision repair
roi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N4261_16060
03430 Mismatch repair
N4261_16060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
roi03400
]
N4261_16060
Enzymes [BR:
roi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N4261_16060
DNA repair and recombination proteins [BR:
roi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N4261_16060
MMR (mismatch excision repair)
Other MMR factors
N4261_16060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
ResIII
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UXH76555
LinkDB
All DBs
Position
3872519..3874636
Genome browser
AA seq
705 aa
AA seq
DB search
MTPIDAPNALADRPDPVPPTGPDAAFADLNPQQRAAVEHGLVAPEDGHGPLLVIAGAGSG
KTKTLAARVARLLQSGADPQRLLLLTFSRRAAGEMERRAGRMLHRALGLRSTQAPPRFPW
AGTFHSVGARLLREYAPRIGLETQFTILDRADAEDLMGLQRQALGLAETTDRFPLKSTCL
NIYSRTVNSEARLDQVLQDHFPWCFAAHDALKQLFGAYVEAKQQQHLLDYDDLLLYWAEM
MSDEEIAQALGERFDHVLVDEYQDTNRLQATILHRLKPTGDRLTVVGDDAQAIYSFRAAE
VRNILDFPQRFQPPARVITLARNYRSTQPILEASNAVIAQSRERHDKQLWSDKVSNEQPQ
LVTVEDEARQAQWVADRILQRREEGLKLTRQAVLFRTASHSAPLELELTRRNIPFVKFGG
LKFLESSHVKDVMSVLRWADNPRHRLAGFRVSQLLPGFGPASARRLLDEMQDAPEVRTVL
QSFQPPGAAKADWTRLSALMIQLMDGSDWPAELEAVVQWYAPHLERLQEDAAIRLADLEQ
IVRIAQGYGSRERFLTELTLDPPEASSDESGVPLKDEDYLILSTIHSAKGQEWEAVYLLN
CVDGCLPSDLSTGAQAQIEEERRLLYVAMTRAKQHLAVMVPQRFYVTQQARHGDRHLYAS
VSRFLPGKVARHFEKVGPANEVQAPLPALVKPAMDVAAKLRKSWS
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgacgccgatcgatgccccgaacgccctcgccgaccgccctgacccggtgccgccgacg
ggacctgacgccgctttcgcggacctgaacccgcaacagcgggccgcggtcgaacacggc
ctggtcgcgccggaggacggccacggcccgctgctggtgattgcgggcgccggctccggc
aagaccaagacgctggcggcgcgggtggcgcgcttgctccagagcggggcggacccgcaa
cgcctgctgctgctcaccttctcacggcgtgcagccggcgaaatggaacgccgcgccggc
cggatgctgcaccgggcgctggggctgcgcagcacccaggcaccgccgcgctttccctgg
gcaggcaccttccacagcgtgggcgcccgactgctgcgcgaatacgcgccacgcatcggg
ttggagacacagttcaccatcctggaccgggccgatgccgaggacctgatgggactgcag
cgccaggccctgggcctggcggagacaaccgaccgctttccgctgaaatccacctgcctg
aacatctactcgcgcaccgtcaacagcgaggcgcgcctggaccaggtgctgcaggaccac
tttccttggtgcttcgccgcgcatgacgcgctcaagcagctgttcggcgcctatgtggag
gccaagcagcaacagcacctgctggactatgacgacctgctgctctactgggccgagatg
atgagcgacgaggagattgcgcaggcgctcggcgagcgcttcgaccatgtgctggtcgac
gaataccaggacaccaaccggctgcaggccaccatcctgcatcggctcaagcccaccggt
gaccggctgaccgtggtcggcgacgatgcgcaggcgatctattccttccgcgcggccgag
gtgcgcaacatcctggattttccgcagcgcttccagccgccggcgcgggtgatcacgctc
gcgcgcaactatcggtcgacccagccgatcctggaggcctccaatgcggtgatcgcccag
tctcgcgagcggcacgacaagcagctgtggtcggacaaggtctcgaacgagcagccccaa
ctggtgacggtggaagacgaggcgcgccaggctcagtgggtcgccgaccgcatcctgcag
cgccgcgaggaaggcctgaaactcacccgtcaggcggtgctgttccgcaccgccagccac
agtgcgccgctggagctggaactcacccgccgcaacatcccgttcgtgaaattcggtggc
ctcaaattcctggagagcagccatgtgaaggacgtgatgagcgtgctgcgctgggccgac
aacccgcgccatcggctggccggcttccgggtgtcgcagttgctgcccggtttcggcccc
gccagcgcgcgccggctgctcgatgagatgcaggacgcgccagaggtgcgcaccgtgctg
cagtccttccagccgccgggtgcggcgaaggcggactggacacggctgagcgccttgatg
atccagctgatggacggatcggactggccggccgagctggaagccgtggtgcagtggtac
gcgccgcacctggagcggctgcaggaggatgcggcgatccgtctggcggacctggagcag
atcgtgcggatcgcccagggctacggcagccgggagcgctttctcaccgagctcacgctc
gatccgcccgaagccagcagcgacgaatccggcgtgcccctcaaggacgaggactacctg
atcctctccaccatccactccgccaagggccaggaatgggaggcggtgtatctgctgaac
tgcgtggacggctgcctgccctcggacttgagcaccggcgcacaggctcagatcgaggaa
gagcgacggctgctgtatgtggcgatgacccgcgccaagcagcatctggcggtgatggtg
ccgcagcgtttctatgtgacgcagcaggcgcgccacggcgatcggcatctctacgccagc
gtgtcacgcttcctgcccggcaaggtggcacgccacttcgagaaggtgggcccggccaac
gaggtccaggccccgctgccggcgctggtgaagccggcgatggacgtggcggcgaagctg
cggaaatcctggagctga
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