Roseateles amylovorans: N4261_16235
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Entry
N4261_16235 CDS
T08701
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
roi
Roseateles amylovorans
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roi03016
]
N4261_16235 (truB)
Enzymes [BR:
roi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
N4261_16235 (truB)
Transfer RNA biogenesis [BR:
roi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N4261_16235 (truB)
Prokaryotic type
N4261_16235 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UXH76589
LinkDB
All DBs
Position
complement(3912069..3913028)
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AA seq
319 aa
AA seq
DB search
MSAVAPRPKIVKRAVHGVLMLDKPLGLTSNDALQKAKRLFRAEKAGHTGTLDPLATGLLP
LTFGAATKFSQVSLEADKGYRATLRLGITTTTGDGEGEILERRDEIARSIDLSAIQSACV
PFRGLISQLPPMYSALKHQGRALYELAREGVTVERQPRQVTIHALDIVDWQADELLLILD
VRCSKGTYIRTLAEDIGSQLGCGAHLAGLRRTSSGPVRVEQAVTLEQLEALDEPARLALL
KAPDSLLGEWPEVELSNDEAGRFLSGMRRRVALADMPQVRVYGQTPHAFLGSGHVAGGEL
IADRLLSPTEIASMLVQAA
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcagtagccccccgccccaagatcgtgaagcgcgccgtgcatggcgtgttgatg
ctggacaagccgcttggcctgaccagcaacgacgcattgcaaaaggccaagcgcctgttc
cgcgccgaaaaggccggccacaccggcacgctggatccgttggccacgggcctgttgccc
ctgaccttcggtgcagcgaccaagttcagccaggtcagcctggaggccgacaagggctac
cgcgccacgctgcggctgggcatcaccacgaccaccggcgacggcgaaggcgagatcctg
gagcgccgcgacgagatcgcccgctcgatcgacctttccgcgatccagtcggcctgcgtg
ccgttccgcggcctgatctctcagttgccgccgatgtactcggcactcaagcaccagggt
cgggcgctgtatgagctggcccgcgaaggcgtgaccgtggaacgtcagccgcgccaggtc
acgattcatgcgctcgacatcgtcgactggcaggctgacgagctgctgctgatcctcgat
gtgcgttgctccaaaggcacctacatccggaccctggccgaggacatcggcagccagctc
ggctgcggggcacatctggcgggcctgcggcggacgtccagcggaccggtccgggtggag
caggcggtgacgctggaacagctcgaagcgctggacgaacccgcccggctggcgttgctg
aaggcgccggacagcctgctgggcgaatggcccgaggtcgagctgagcaatgacgaggcg
ggccgtttcctgtccggcatgcgccggcgggtggcgttggccgacatgccgcaagtgcgg
gtgtacggccagacgccccatgccttcctgggcagcgggcatgtcgccggcggcgaactg
atcgccgaccgcctgctcagcccgaccgaaatcgcctcgatgctggtgcaggccgcctga
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