KEGG   Roseateles amylovorans: N4261_19960
Entry
N4261_19960       CDS       T08701                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
roi  Roseateles amylovorans
Pathway
roi00010  Glycolysis / Gluconeogenesis
roi00020  Citrate cycle (TCA cycle)
roi00260  Glycine, serine and threonine metabolism
roi00280  Valine, leucine and isoleucine degradation
roi00310  Lysine degradation
roi00380  Tryptophan metabolism
roi00620  Pyruvate metabolism
roi00630  Glyoxylate and dicarboxylate metabolism
roi00640  Propanoate metabolism
roi00670  One carbon pool by folate
roi00785  Lipoic acid metabolism
roi01100  Metabolic pathways
roi01110  Biosynthesis of secondary metabolites
roi01120  Microbial metabolism in diverse environments
roi01200  Carbon metabolism
roi01210  2-Oxocarboxylic acid metabolism
roi01240  Biosynthesis of cofactors
Module
roi_M00009  Citrate cycle (TCA cycle, Krebs cycle)
roi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
roi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
roi_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:roi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    N4261_19960 (lpdA)
   00020 Citrate cycle (TCA cycle)
    N4261_19960 (lpdA)
   00620 Pyruvate metabolism
    N4261_19960 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    N4261_19960 (lpdA)
   00640 Propanoate metabolism
    N4261_19960 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    N4261_19960 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    N4261_19960 (lpdA)
   00310 Lysine degradation
    N4261_19960 (lpdA)
   00380 Tryptophan metabolism
    N4261_19960 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    N4261_19960 (lpdA)
   00670 One carbon pool by folate
    N4261_19960 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:roi04147]
    N4261_19960 (lpdA)
Enzymes [BR:roi01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     N4261_19960 (lpdA)
Exosome [BR:roi04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   N4261_19960 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Biotin_lipoyl_2 FAD_binding_2 Pyr_redox_3 Thi4 HI0933_like AlaDh_PNT_C FAD_binding_3 DEC-1_N NAD_binding_8 GCV_H DAO HlyD_D23 RnfC_N Lycopene_cycl
Other DBs
NCBI-ProteinID: UXH77264
LinkDB
Position
complement(4800286..4802103)
AA seq 605 aa
MALVEVKVPDIGDFKDVAIIEILVKVGDTVKQEQSLITVESDKASMEIPSSQAGVVTALK
VKLGDKINEGTVLLTLESEGAAAPAPAASAPAPAPAAAAAPAAPVAPTVAAPQAATYAGS
ADGEFDVIVLGGGPGGYSAAFRAADLGLKVALVERYATLGGVCLNVGCIPSKALLHVAAV
MDEVKHFADLGVEFGEPKVELPKLLNHKKKVIGKLTGGLAMMAKMRKVTVVRGYGTLLDA
QHLSVEETSGEAQVRTGTTQTLKFKKIILAAGSQAVRLPFMPDDPRVIDSTGALELTSRP
KRMLIVGGGIIGLEMGTVYSTLGARLDVVEMLPTLMTGADRDLVKVWQKMNAPRFDNIML
NTKTVSAEATPEGIKVTFEGEGAPKEPQVYDLVLQAVGRSPNGKKIGADKAGVVVTDRGF
IPVDVQMRTNVPNVFAIGDLVGQPMLAHKAVHEGHVAAEVIAGELLGDEALAKSRFDARV
IPSVAYTDPEVAWVGVTEDEAKARGIKVKKGLLPWSASGRAIANGRDEGFTKLLFDEETH
RIIGGGIVGTHAGDMIGEIALAIEMGADAVDIGKTIHPHPTLGESIGLAAEVAHGSCTDV
PPPRK
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggcactggttgaagtcaaggtccccgacatcggtgatttcaaggatgtcgcgatcatc
gagatcctggtcaaggtcggcgacaccgtgaagcaggagcagagcctgatcacggtggag
tcggacaaggcgtcgatggagatcccgtcctcgcaggccggcgtggtcacggcgctgaag
gtcaagctcggcgacaagatcaatgaaggcacggtgttgctgacgctggaaagcgaaggc
gctgccgcgcctgcgccagccgcttcagcccccgcaccggcgcccgccgcggcggctgcg
cctgctgctccggtcgccccgaccgttgcggcgccacaagccgcgacctacgccggaagc
gctgacggcgagttcgatgtgatcgtgctcggcggcggtcccggcggctactcggccgca
ttccgcgcggcggacctgggcctgaaggtcgccctggtcgagcgctacgccacactgggc
ggcgtgtgcctgaacgtgggttgcatcccgtcgaaggcgctgctgcatgtggctgccgtg
atggacgaggtcaagcacttcgccgacctgggcgtcgaattcggcgaacccaaggtcgaa
ctgcccaagctgctcaatcacaagaagaaggtgatcggcaaactgaccggcggcctggcc
atgatggccaagatgcgcaaggtcaccgtggtgcgcggctacggcacgctgctcgatgcc
cagcatctgagcgtcgaggaaaccagcggcgaggcgcaggtccgcaccggcaccacccag
accctgaagttcaagaagatcatcctcgcagcgggctcgcaggccgtgcggctgcccttc
atgcccgacgacccgcgggtgatcgactccaccggcgcgctggagctgaccagccggccg
aagcgcatgctgatcgtcggcggcggcatcatcggcctggagatgggcaccgtctactcg
acgctgggcgcgcgcctggacgtggtcgaaatgctgcccacgctgatgaccggcgccgat
cgcgacctggtcaaggtctggcagaagatgaacgcgccgcgctttgacaacatcatgctg
aacacgaagaccgtgtcggccgaggcgacgcccgaaggcatcaaggtgacctttgaaggc
gaaggcgcaccgaaggagccgcaggtctacgacctggtgctgcaggccgtcggacgcagc
cccaacggcaagaagatcggcgcggacaaagccggcgtggtcgtgaccgaccgcggcttc
attccggtggacgtgcagatgcgcaccaacgtgcccaacgtgtttgccatcggcgacctg
gtcggccagccgatgctggcgcacaaggcggtgcacgaaggccatgtggcggcggaagtc
atcgccggcgaattgctgggtgacgaggcgctggccaagtcgcgcttcgatgcccgggtg
atcccgagcgtggcctacaccgatccggaagtggcctgggtcggcgtgaccgaagacgag
gccaaggcccgcggcatcaaggtgaagaagggcctgctgccctggagcgcctccggtcgc
gccatcgccaacggccgcgacgagggcttcaccaagctgctgttcgatgaggagacccat
cgcatcatcggcggcggcatcgtgggcacccatgccggcgacatgatcggtgagatcgcg
ctggccatcgagatgggcgcggatgcggtcgacatcggcaagaccatccatccccatccc
acgctgggcgaaagcatcggcctggcggcggaagtggcccatggctcctgcaccgacgtg
ccgcctccgcggaaataa

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