Roseateles amylovorans: N4261_22530
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Entry
N4261_22530 CDS
T08701
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
roi
Roseateles amylovorans
Brite
KEGG Orthology (KO) [BR:
roi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
roi03016
]
N4261_22530
Enzymes [BR:
roi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
N4261_22530
Transfer RNA biogenesis [BR:
roi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N4261_22530
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
UXH77727
UniProt:
A0ABY6AXM5
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All DBs
Position
5428500..5430548
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AA seq
682 aa
AA seq
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MFALFEDAGKFFAGRILSEAESSMQIELESGKRVKVKAANVLIKFDKPSPAELIADGQRL
AQEIDLDLAWEFAPETEFTFGDLARDYFDAKATLAQQAGALFRLFEAPHYFRRMGKGAFK
KAPADIVKAALLGIERKKQVAAQIEQWTEELAQGRCPAPIADQIYKILFRPDKNGPEYKA
LVEAAKRSQKAPLDLLKDAGAINSPYQFHWKRFLFEHFPKGTGFPALSAPEIKDELPLAP
VRAFSIDDSATTEIDDALSVQGLGSGTVIFGVHIAAPGLAIQPDSPVDKVARDRYSTVYM
PGWKLTMLPDEVVQAYTLIEGRDCPAVSIYLTFDEATLELQSRETKLERVPIAVNLRHDK
LDHVITDATLSGAAPADYAFADELAFAYRLAKDLKAKREVVRGKPENFNRPDYNFRLEGN
ADGEPDGSEQVRISIRARGTALDLIVAEAMILANSHWGAILAESGVPGIYRSQASLAPGI
KVRMGTKPAPHAGMGVAQYTWATSPLRRYVDLVNQWQIIACARHGRTAALVAPFKPKDAQ
LFSVISGFEAAYSAYNGFQSGIERYWTLRHLQQQGLTELTASVMKDGLVRADELPLVFRA
LGCENLPRNAHVRVRITGLDELTLDVHASLIERLDEAAPAAESEGAESEEDEEPSGVLTL
AIDLNADDSAPTDTAAAPASAS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccctcttcgaagacgccggaaaattcttcgccggccgcatcctgtccgaagcc
gaatcctcgatgcagatcgagctcgagtcgggcaagcgcgtgaaagtaaaagccgccaat
gtcctgatcaagttcgacaagccctccccggccgaactgatcgcagacggccagcggctg
gcccaggagatcgatctggatctggcctgggagttcgcccccgagaccgaattcacgttc
ggcgacctggcgcgcgactatttcgacgccaaagccaccctggcccagcaggccggagcg
ctgttccgcctgttcgaggcgccgcactatttccgccgcatgggcaagggcgcgttcaag
aaggcgccggccgacatcgtcaaggccgcgctgctgggcatcgaacgcaagaagcaggtc
gccgcgcagatcgagcaatggaccgaggaactggcccagggccgttgcccggcgccgatc
gccgaccagatctacaagatcttgttccgccctgacaagaacggcccggaatacaaggcg
ctggtcgaggcggccaagcgcagccagaaggcgccgctggacctgctcaaggacgcgggc
gcgatcaacagcccctatcaattccactggaagcgcttcctgttcgagcacttccccaag
ggcaccggcttcccggcgctctccgcgcccgagatcaaggacgagctgccgctggcaccg
gtgcgggccttctcgatcgacgattccgccaccaccgagatcgacgatgcgctgtcggtc
cagggcctgggcagcggcacggtgatcttcggggtgcacatcgcggccccggggctggcc
atccagccggattccccggtcgacaaggtggcacgcgaccgctactccaccgtctacatg
ccgggctggaagctcaccatgctgccggacgaggtggtccaggcctacaccctgatcgaa
ggccgggactgcccggccgtcagcatctacctgaccttcgatgaagcgaccctggagctc
cagtcccgcgagaccaagctcgagcgggtgcccattgccgtcaacctgcggcatgacaag
ctcgaccatgtcatcaccgatgcgacgctgagcggcgccgcaccggccgactacgccttc
gccgacgaactggcctttgcctaccggctggccaaggacctcaaggccaagcgcgaggtg
gtgcgcggcaagccggagaacttcaaccggcccgactacaacttccgcctcgaaggcaat
gccgacggcgagcccgatggcagcgaacaggtgcggatctcgatccgcgcgcgcggcacc
gcgctggacctgatcgtggccgaggccatgatcctggccaacagccactggggcgcgatc
ctggccgaatccggcgtgcccggcatctaccgcagccaggccagcctggcgcccggcatc
aaggtgcgcatgggcaccaagccggcgccgcacgctggcatgggtgtggcgcagtacacc
tgggccacctcgccgctgcggcgctatgtggacctggtgaaccagtggcagatcattgcc
tgcgcccgccacggacgcaccgccgcgctggtggcgccgttcaagcccaaggatgcgcag
ctgttctcggtcatctccggcttcgaggccgcctacagcgcctacaacggcttccagtcc
ggcatcgaacgctactggaccctgcgtcatctgcagcagcagggcctgaccgaactgact
gcctcggtcatgaaggacggcctggtgcgcgccgacgagttgccgctggtcttccgggca
ctgggctgcgagaacctgccgcgcaatgcgcatgtgcgggtgcgcatcaccggcctggac
gagctgacgctggatgtgcatgcctcgctgatcgagcgcctggacgaagccgccccggcc
gccgagtccgaaggtgccgaatccgaggaggacgaagaacccagcggcgtgctgacgctg
gccatcgacctcaacgccgacgacagcgctcccaccgacaccgccgccgcccccgcgagc
gcttcctga
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