Roseateles sp. MS654: ACO228_13000
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Entry
ACO228_13000 CDS
T11465
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
roj Roseateles sp. MS654
Pathway
roj03030
DNA replication
roj03410
Base excision repair
roj03420
Nucleotide excision repair
roj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
roj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACO228_13000 (polA)
03410 Base excision repair
ACO228_13000 (polA)
03420 Nucleotide excision repair
ACO228_13000 (polA)
03440 Homologous recombination
ACO228_13000 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
roj03032
]
ACO228_13000 (polA)
03400 DNA repair and recombination proteins [BR:
roj03400
]
ACO228_13000 (polA)
Enzymes [BR:
roj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACO228_13000 (polA)
DNA replication proteins [BR:
roj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ACO228_13000 (polA)
DNA repair and recombination proteins [BR:
roj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ACO228_13000 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACO228_13000 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XRE03691
LinkDB
All DBs
Position
complement(3080803..3083580)
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AA seq
925 aa
AA seq
DB search
MSKPLMLLVDGSSYLYRAYHAMPDLRGPAGQPTGAIHGMVAMLKKLRDDCGAEHAACVFD
ASGPTFRDEWYPEYKAQRAPMPDALREQIEPIHEVVKLLGWPVLTVPGIEADDCIGTLSR
VAAQAGHQVLISTGDKDLAQLVTPDVSLINTMTNEKLDEAGVLAKFGVPPDRIIDYLTLM
GDTVDNVPGVEKVGPKTAAKWIGEHGSLDGVIANADKIKGVAGENLRKALDWLPMGRKLV
TVKMDCDLCMHVAGWPALEALAFNPVDEAGLLDFYTRNGFKTWKRDLEARLGGESPRRVA
AEPDLGAAPSADAFAEHQPPAIPLDKRYETIVDFSRLDAWIEQLNAAELAAFDTETDSLD
PMQARIVGLSFSVKPGEAAYIPLRHEGPDAPEQLPMDEVLARLKPWLEDPLKKKVAQNVK
YDTHVLANHGIAVQGTAYDTMLESYVLEAHRSHSLEALADRVLGRKGLSYEDLCGKGAHQ
IPFAQVEVAKASEYSCEDSEMCLHVHQTLMPRLAADEGLKFIYEQVEMPVSALLARIERN
GVLIDAAKLQAQSADLGQRMVAAEQAAYEIAGQPFNIGSPKQIGEILFNRLGLPVVKRTA
TGAPSTDEEVLEKLSADFPLPAKILEYRALSKLKSTYTDKLPLMVNARTGRVHTTYSQAV
AVTGRLSSNEPNLQNIPIRTADGRRVREAFIAPPGHRIVSADYSQIELRIMAHMSEDPGL
LRAFQEGQDVHRATAAEVFGGALDAVTPEQRRYAKTINFGLIYGMGAFGLAQSLGIEQKA
AKDYIDRYFTRFAGVRRYMDDTKQFAKEKGYVETVFGRRLWLPEINSGNGPRRSGAERQA
INAPMQGTAADLIKLAMIAVQQALDEQGKKTRIVMQVHDELVFEVPDEELDWVKAEVPTL
MAGVAALKVPLLAEVGVGANWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacctctgatgctgctggtcgacggctccagctacctctaccgtgcctaccac
gccatgcccgacctgcggggacccgccgggcagcccaccggcgccatccacggcatggtg
gccatgctgaagaagctgcgcgacgactgcggcgccgagcacgccgcctgcgtcttcgat
gcctccggtccgaccttccgcgacgagtggtaccccgagtacaaggcccagcgcgccccg
atgcccgacgcgctgcgcgagcagatcgagccgatccacgaggtcgtgaagctgctcggc
tggccggtcctgaccgtgcccggcatcgaggcggacgactgcatcggcacgctgtcgcgc
gtggcggcgcaggccgggcaccaggtgctgatctccaccggcgacaaggacctggcccag
ctggtcacgcccgatgtgagcctgatcaacaccatgaccaacgagaagctggacgaggcc
ggcgtgctggccaagttcggcgtgccgccggatcgcatcatcgactacctgacgctgatg
ggcgacaccgtggacaacgtgcccggcgtcgagaaggtgggccccaagaccgcggccaag
tggatcggtgagcatggctcgttggacggcgtcatcgccaacgcggacaagatcaagggc
gtggccggcgagaacctgcgcaaggcgctggactggctgccgatgggacgcaagctggtg
acggtgaagatggactgcgacctgtgcatgcacgtcgcgggctggcccgcgctggaggcg
ctggccttcaatccggtggacgaggccggcctgctggacttctacacccgcaacggcttc
aagacgtggaagcgcgacctggaggcgcgcctgggcggcgagtcgcccaggcgcgtggcg
gcggagccggacctcggcgcggccccctcggccgacgccttcgccgagcaccagccgccc
gcgatcccgctcgacaagcgctacgagaccatcgtcgatttctcccgcctggacgcctgg
atcgagcagctcaacgccgccgagctggccgccttcgacaccgagaccgattccctggac
ccgatgcaggcgcgcatcgtcggcctgagcttcagcgtgaagccgggcgaggccgcctac
atcccgctgcggcacgagggccccgacgcgccggagcagttgccgatggacgaagtgctc
gcacggctgaagccctggctggaagacccgctgaagaagaaggtcgcgcagaacgtcaag
tacgacacccatgtgctcgccaaccacggcatcgcggtccagggcacggcctacgacacg
atgctggaaagctatgtgctggaggcgcatcgcagccacagcctcgaggcgctggcggac
cgcgtgctcggccgcaaggggctgagctacgaggacctgtgcggcaagggcgcgcaccag
atcccgtttgcgcaggtcgaggtcgcgaaggcgtcggagtactcgtgcgaggactccgag
atgtgcctgcacgtgcaccagacgctgatgccgcgcctggcggcggacgagggactgaag
ttcatctacgagcaggtcgagatgccggtgtccgcgctgctggcgcggatcgagcgcaac
ggcgtgctgatcgacgcggcgaagctgcaggcgcagagcgccgacctgggtcagcgcatg
gtcgccgccgagcaggcggcctatgagatcgcgggccagcccttcaacatcggctcgccg
aagcagatcggcgagatcctgttcaaccgcctgggcctgccggtggtgaagcgcaccgcg
accggcgcgccgtcgacggacgaggaggtgctggagaaactgtctgcggacttcccgctg
ccggccaagatcctggagtaccgcgcgctgtccaagctcaagagcacctacacggacaag
ctgccgctgatggtgaacgcgaggacgggccgggtgcatacgacctactcgcaggcggtc
gcggtgacgggccgcctgtccagcaacgagcccaacctgcagaacatcccgatccgcacg
gccgatggccgccgcgtgcgcgaggccttcatcgcgccgccgggacaccgcatcgtgtcg
gcggactactcgcagatcgagctgcgcatcatggcgcacatgagcgaggacccaggcctg
ctgcgggcgttccaggaggggcaggacgtccaccgggcgacggcggcggaggtcttcggc
ggcgcgctggacgcggtgacgccggagcagcggcgctacgccaagacgatcaacttcggc
ctgatctacggcatgggcgcgttcgggctggcgcaatcgctgggcatcgagcagaaggcg
gcgaaggactacatcgaccgctacttcacgcggttcgcgggcgtgcggcgctacatggac
gacacgaagcagttcgcgaaggagaagggctacgtcgagacggtcttcgggcggcgcctg
tggctgccggagatcaactccggcaatggcccgcgccgcagcggcgcggagcgccaggcg
atcaacgcgccgatgcagggcacggcggcggacttgatcaagctggcgatgatcgcggtc
cagcaggcgctggacgagcaggggaagaagacgaggatcgtgatgcaggtgcatgacgaa
ctggtcttcgaggtgcctgatgaggagctcgactgggtgaaggccgaagtgccgacgctg
atggcgggtgtcgcggccctgaaggtgccgctgctggccgaggtgggtgtcggcgccaac
tgggacgaagcgcactga
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