Roseovarius sp. AK1035: RAK1035_0011
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Entry
RAK1035_0011 CDS
T05517
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
rok
Roseovarius sp. AK1035
Pathway
rok02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rok00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RAK1035_0011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rok02000
]
RAK1035_0011
Transporters [BR:
rok02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
RAK1035_0011
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_16
ABC_ATPase
AAA_22
AAA_29
AAA
TMEM208_SND2
MMR_HSR1
AAA_18
AAA_25
HemY_N
Borrelia_P13
Motif
Other DBs
NCBI-ProteinID:
AWZ18722
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Position
complement(10021..11841)
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AA seq
606 aa
AA seq
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MRHARITTSDAPAKGWRTIRRVAPYLWPADQPWVKRRVVFALMALVVAKLIGVGTPFFYK
AAVDMLAGEGQSAAWMLGAGAVGLTVAYGMARLMTVSFQQLRDVIFARVAQRALRALALK
TFQHIHAMSMRYHITRKTGGLSRIIERGVKGVEFLLRFLLFSIGPLVLELALIGIVLAVI
FDIWYLVVVVAVIGTYVAFTFKVTEWRVRLRKEMNDQDTDANQKAIDSLLNFETVKYFGA
ERREANRYDAAMAGYEKAALQTSYSLAFLNFGQSLIITGGLVIVMVMAAVGVQSGSMTVG
DFVMVNAYMIQITMPLNFLGTVYREIRQALVDMSEMFDLLEQQGDVEDKFGADVLKVTGA
AVRLEAVDFGYDTNRPILKGVTLDVPAGQTVAVVGPSGSGKSTIGRLLFRFYDVQAGRVL
IDGQDVCDVTQESLHAAIGVVPQDTVLFNDTVGYNIGYGRAGATQAEIEEAARAAQIHDF
IASLPEGYATQVGERGLKLSGGEKQRVGIARTLLKNPPILLLDEATSALDTQTEREIQGA
LARAAEGRTVIMIAHRLSTVANADRIVVLDQGVVVEEGTHSDLLARQGRYAALWQRQASE
DAEEAA
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgcgccacgccagaattacgacatcagacgctcctgcaaagggctggcgcaccattcgc
cgtgtcgcgccctatctctggcctgccgatcagccttgggtcaaacgccgtgtggtgttc
gcgctgatggctttggtggtggccaaattgatcggtgtcggaaccccgtttttctataaa
gccgcagtcgacatgctggccggagagggacaatccgctgcctggatgttgggggcgggg
gcggttggcctgaccgtcgcatatggcatggcgcgcctcatgacggtaagctttcagcaa
ctgcgcgatgtgatctttgcccgcgtcgcacagcgcgccctccgcgcgcttgccctcaag
acattccaacatatccacgcaatgtcaatgcgttaccacatcacgcgcaagacgggtggc
ctcagccggattatcgaacgtggggtgaaaggggtcgagttcctgctgcggttcctgctc
ttttccatcggtcctctggtgctggaactggcacttatcgggatcgttctcgcggtcatt
ttcgatatctggtatctggttgtggtcgtcgccgtgatcggcacttatgtcgccttcacc
ttcaaggtcacggaatggcgcgtccgcctgcgcaaagaaatgaacgatcaggataccgac
gccaaccaaaaggcgattgatagcctgctgaactttgagaccgtcaaatatttcggtgca
gaacgccgcgaggccaaccgctacgatgcggccatggctggctatgagaaagctgcgctt
cagacctcttactcattggcctttctcaactttgggcaatccctgatcattacgggcggg
ttggtcatcgtgatggtcatggcagcggtgggggttcaatcgggctctatgaccgtcggc
gactttgtcatggtcaacgcctatatgatccagatcaccatgccgctcaactttctgggc
accgtctatcgagagatccggcaagctctggtcgatatgtctgaaatgttcgatttgtta
gagcaacaaggggatgttgaggataagtttggtgcagatgttctaaaagtaacaggtgcc
gccgttcgattagaggcggtagattttggatatgacaccaatcgaccgatcctaaagggc
gttacgcttgatgttccggcggggcagacggttgcggtggttgggccctctggatcgggc
aagtcaaccatcgggcgtcttcttttccgcttttacgatgtgcaggcggggcgtgttctg
attgatggccaggacgtgtgcgatgtcacgcaagaaagccttcatgccgctatcggtgtg
gtgccgcaggacacggtgctctttaacgacaccgttggctacaacatcggatatgggcgc
gccggggccacacaagccgagatcgaagaggccgcgcgtgcggcccagatccacgatttt
atcgcaagtttgcccgagggttacgcgacgcaagtgggggaacgcggcctcaaactctcg
ggcggtgaaaagcagcgcgtgggaatcgcgcgcactttgcttaaaaatccaccaatcctg
ctgctggacgaggcgacaagcgcgctcgacactcagactgagcgggagatccaaggggct
ttggcgcgtgcggccgaagggcgcaccgtgatcatgattgcgcaccgcctgtccaccgtc
gccaatgcggatagaattgtcgttctagatcagggggttgttgtcgaggaggggacgcat
tcagacctcttggcacggcaggggcgctacgccgcgctctggcaacggcaggccagtgag
gatgcagaagaggcggcctga
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